Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03334 ATGGAAACTATACTCTACTTTGTTATCATCTCCACAGTTCTTTTCTTCCTTCACCGGAGAACTCGCCGCCGGCGACACAATCTCCCGCCGGGAAATCTAGGACTACCCTTTATAGGTGAAACCTTCCAGCTTATCTCAGCTTACAAAACCGACAACCCAGAACCATTTATAGACAAAAGAGTGAACCGGTACGGTTCAATTTTCACAACACATGTATTTGGTGAACCGACTGTTTTTTCAGCTGACCCGGAAACAAACCGGTTTATTTTAATGAATGAAGGGAAGCTTTTTGAATGTAGTTATCCCGGTTCAATATCAAACCTTTTGGGAAAACATTCTTTGCTTCTTATGAAAGGTTCTCTTCATAAGAGAATGCATTCACTTACTATGAGTTTTGCTAATTCTTCTATTATTAAAGATCATCTTCTTGTTGATATTGATCGGCTTATTCGGCTTAATTTGGATTGTTGGTCTGACCGGGTTTTGCTCATGGAGGAGGCCAAGAAGATAACGTTTGAGTTGACAGTGAAGCAGCTTATGAGTTTTGATCCAGGTGAATGGACTGAGACTTTGAGGAAAGAGTACGTTCTCGTGATTGAAGGATTTTTCACACTTCCTTTACCATTACTTTCTAGTACCTACCGTAGGGCAATCAAGGCAAGAACAAAGGTGGCAGAGGCATTAACATTGATTGTGAGgcagagaagaaaagaaagtgtaATGGGGGAGACAAAGAATGACATGCTAGGGGCATTGTTGGCTTCTGGCGACCAATTTTCCGATGAGCAAATAGTCGATTTTATGTTGGCATTGCTCGTCGCCGGTTATGAAACCACCTCTACTATAATGACTCTTGCGGTCAAGTTTCTCACTGAGAATCCTCTAGCATTGGCACAACTCAAGGAAGAGCATGATCAAATCAGAGCAAAGAAGAGTTGCCAAGAGGAACCATTGGAGTGGATAGATTACAAGTCAATGACATTTACTCAATGTGTTGTGAATGAAACTTTAAGGATGTCAAATATAATAAGTGGGATATTTAGGAGAGCAATGACAGACATCAATATCAAAGGCTACACTATTCCAAAGGGGTGGAAGGTCTTTGCATCATTTCGTGCCGTACATCTAAACCCCGATCATTTCAAAGATGCTCGCACTTTCAATCCATGGAGATGGCAGAGAAAATCAGAATCGACGACCCCAGGAAATATATATACACCATTTGGAGGAGGGCCGCGGCTGTGCCCCGGCTATGAGCTAGCCAGAGTTGTGCTATCGGTATTTCTTCACCGCATAGTCACTCGTTACAGTTGGTCTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACCACTCGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGTAGAGTGCAATCGAATTTGGTCATGTAA 1419 0.4165 METILYFVIISTVLFFLHRRTRRRRHNLPPGNLGLPFIGETFQLISAYKTDNPEPFIDKRVNRYGSIFTTHVFGEPTVFSADPETNRFILMNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDCWSDRVLLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLLSSTYRRAIKARTKVAEALTLIVRQRRKESVMGETKNDMLGALLASGDQFSDEQIVDFMLALLVAGYETTSTIMTLAVKFLTENPLALAQLKEEHDQIRAKKSCQEEPLEWIDYKSMTFTQCVVNETLRMSNIISGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQRKSESTTPGNIYTPFGGGPRLCPGYELARVVLSVFLHRIVTRYSWSPAEEDKLVFFPTTRTQKRYPIIVKRRVQSNLVM 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03334 472 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PANTHER CYTOCHROME P450 90A1 5 464 - -
Tsu05g03334 472 SUPERFAMILY Cytochrome P450 20 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Tsu05g03334 472 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 Pfam Cytochrome P450 204 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 Gene3D Cytochrome P450 17 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03334 472 PANTHER CYTOCHROME P450 26 5 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03334 Tsu-Chr5 44649964 44655895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03334 117 465 Cytochrome P450 AT5G05690 79.714 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03334 K09588 - gmx:100781291 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03334 05 44649964 44655895 Tsu05g03334 05 44649964 44655895 ECH
Tsu03g01845 03 18982982 18987221 Tsu05g03334 05 44649964 44655895 PCT