Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03320 ATGAAGTCTTTTATGACGTTACTTCTCTACTTTGCTTTCCAAATATTGGTATATTGCATGCCATTTGCAACGGTTGCTCTTACTTTGAGTTCAAAGACTGATAAGCTTGCTTTGCTTGCATTGAAAGAAAAGCTTACAAATGGTGCCCCAGATTCTCTTCCATCATGGAATGAATCTCAACATTTTTGTGAATGGCAGGGTGTTACATGTGGCCGTCGTCATATGAGAGTCACTGCCTTGCATTTTGAAAATCAAACATTGGGTGGTACTCTTGGTTCATCCGTGGGAAATCTAACATTTCTAAGAATACTACAACTTAGAAATGTCAACTTGTATGGTGAAATTCCAAGTCAAATTGGTCGTTTAAAGCGATTGCAAGTTCTTAACTTAAAGAACAACAATCTTCACGGTGAGGTTCCTATGGAGCTCACAAATTGCACGAATATCAAGGTAATTCTATTGCGCAGCAATCGACTCAGTGGAAGAATTCCGACATGGTTTGACTCAATGAATCAACTTACCCAGTTGAATCTCGCTGCCAATAATCTAGTTGGTACTATTCCGTCTTCCGTGGGAAATGTTTCATCACTCCAAAAATTATCATTTGGAGAGAATCGCTTGGAAGGAAGCATACCTCATTCATTGGGTATGTTGTCAAGTTTGAATCTACTGATTCTAGAATCAAATAACATATCAGGTGAAATCCCTCATTCTCTTTACAACCTATCAAATATTCAAGTTTTTGATCTTGGGACAAACAAGCTCTCCGGTAGTCTTCCAAAAAATTTGAACGTTGTTTTTCCCAATCTTATAGCATTCTTGGTAGGAGACAACCAAATAGGCGGAACTTTTCCGTCTTCATTATCCAACCTCACTGAAATGTTAATGTTAGATATATCATCTAATAAGTTTTATGGGTCAATACCTCTTACTTTGGGTCAATTAAATAAACTTGAGATATTTGATATTGGAGAAAATAATTTTGGGAGTGGAGAAGCTCATGATTGGGATTTCCTTTCATCGTTAACCAATTGTACTCAGTTGTCTATGATCTTTTTGTTTAACAATGGTTTTGGTGGTGTGTTACCGAATCTTATAGGAAACTTTTCCACCCATCTCCAAATTCTTCATATGgagtttaataaaatacatGGAGTGATACCAGAAAGAATTGGACAACTAATTGGTTTGACTCTCTTAGTTATTGGAGACAATTTCCTTGAGGGAACAATTCCAGATTCAATAGGAAAGCTTAAGAATATAGTATCATTGGACTTCGGTAATAACAAATTGTCTGGTAACATCCCTTTAGTCATTGGTAATCTTACTGTGTTGTCTCAACTAGATCTATCTAGCAATAAATTGGAAGGAAACATTCCATTTACCATAGGAAATTGCACCCAATTGCAGAAATTAAGTTTTTCTAGTAACAAATTGAGTGGTGAAATTCCTACTCAAACATTTGGCTATCTAGATGGTTTAATATATCTTGAATTGTCCAACAACTCCTTAACCGGCCCTATTCCTTCAGAGTTTGGTAACTTGAAACAACTTTCAATATTGTATCTAAGCTTAAATAAGTTGTATGGTGAACTTCCTAACGACTTAGCTTCTTGCGTAGCATTGATAGAACTTGAGCTGGGGAGAAACTTCTTCAATGGGTCTATACCTTTGTTTTTGGGCTCCTCTTTACGGTCCCTCGAAATCTTAGACCTTTCTGCCAATAATTTCTCAAGCATAATCCCCTATGAACTACAAAATCTAACATTCTTGCATAAGTTGGACTTGTCTTCTAACAATCTCTATGGTGAGGTTCCTATAGGAGGTGTCTTTAGCAATGTTTCAGCAATTACACTAACCGGAAACAAGAACCTTTGTGGAGGAATACCTAACTTGAACCTCCCTCCATGTTCTAAAGTTCCCACCAAGAAACATAAAAGATCTCACAAAAAGAAACTTATCATCATCAGTGTAATTGGCGGAATTTTGATCTCTTTCATAGCTTTTATaattgtctattttctcacgaGAAAGCCTAAAATGTTACTTTCTTCACCATCTTTGCAAAATGGGAGATTAAGGGTTACTTATGGAGATCTACATGATGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGAATGGGAAGCTTTGGCTCTGTTTATAAAGGGcatcttcttcattttgatAGAGTTATTGCTATAAAAGTGTTGAATCTTGAAAAACATGGTGCTGCAAAGAGTTTTGTGGCTGAATGTAAAGCTCTAGCGAAGATGAAGCATCGGAATCTTGTAAAGATCCTAACTTGTTGTTCAAGTGTTGATTATAAGGGTGAAGATTTCAAGGCGATTGTTTTTGAGTTCATGTCTAATGGGAGTTTGGAAAACTTGTTGCACAATTATGAACTTGAGTCTACAAATCTTAGTTTGAACTTCACACAAAGGGTAGACATTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCATCATAACATAGAGCAAGTTGTAGTTCATTGTGATGTTAAACCAAGCAATGTTCTTCTTGATGATACCCTTGTTGCCCATTTAGGAGACTTTGGCATAGCTAAGCTCATTCATGGAGCCACGGAGAATTCCGGTAAAGACCAAGTTAATTCTTCCGCAATTAAGGGAACTATCGGATATGTTCCTTCTGAGTATGGCGCAGGTGGTCAAGTATCACCACAAGGAGATATCTACAGCTACGGCATTCTTCTGCTAGAAATGCTCACTGCAAAGCGACCAACAGATAGCATGTTTTTTGAGAATCTAAATCTACACAAATTCTGTAAGATGAATATTCCAGAAGGAATCATTGAGATAGTAGATTCACATTTGCTTATGCCATATGTTGAAGATCAAACAGGGATTGTGGAAAACAAGATAAAGGAGTGTCTAGTGATGTTTGCTAAAATTGGAATTGCATGTTCCGAAGAATTTCCAACTCAGCGAATGCTCATAAAAGATGTTATAATGAAGTTGCTTGAAATTAAACAGAAGTTGACTTGCTAG 3033 0.3627 MKSFMTLLLYFAFQILVYCMPFATVALTLSSKTDKLALLALKEKLTNGAPDSLPSWNESQHFCEWQGVTCGRRHMRVTALHFENQTLGGTLGSSVGNLTFLRILQLRNVNLYGEIPSQIGRLKRLQVLNLKNNNLHGEVPMELTNCTNIKVILLRSNRLSGRIPTWFDSMNQLTQLNLAANNLVGTIPSSVGNVSSLQKLSFGENRLEGSIPHSLGMLSSLNLLILESNNISGEIPHSLYNLSNIQVFDLGTNKLSGSLPKNLNVVFPNLIAFLVGDNQIGGTFPSSLSNLTEMLMLDISSNKFYGSIPLTLGQLNKLEIFDIGENNFGSGEAHDWDFLSSLTNCTQLSMIFLFNNGFGGVLPNLIGNFSTHLQILHMEFNKIHGVIPERIGQLIGLTLLVIGDNFLEGTIPDSIGKLKNIVSLDFGNNKLSGNIPLVIGNLTVLSQLDLSSNKLEGNIPFTIGNCTQLQKLSFSSNKLSGEIPTQTFGYLDGLIYLELSNNSLTGPIPSEFGNLKQLSILYLSLNKLYGELPNDLASCVALIELELGRNFFNGSIPLFLGSSLRSLEILDLSANNFSSIIPYELQNLTFLHKLDLSSNNLYGEVPIGGVFSNVSAITLTGNKNLCGGIPNLNLPPCSKVPTKKHKRSHKKKLIIISVIGGILISFIAFIIVYFLTRKPKMLLSSPSLQNGRLRVTYGDLHDATNGFSSSNLVGMGSFGSVYKGHLLHFDRVIAIKVLNLEKHGAAKSFVAECKALAKMKHRNLVKILTCCSSVDYKGEDFKAIVFEFMSNGSLENLLHNYELESTNLSLNFTQRVDIALDVAHALDYLHHNIEQVVVHCDVKPSNVLLDDTLVAHLGDFGIAKLIHGATENSGKDQVNSSAIKGTIGYVPSEYGAGGQVSPQGDIYSYGILLLEMLTAKRPTDSMFFENLNLHKFCKMNIPEGIIEIVDSHLLMPYVEDQTGIVENKIKECLVMFAKIGIACSEEFPTQRMLIKDVIMKLLEIKQKLTC 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03320 1010 ProSitePatterns Protein kinases ATP-binding region signature. 713 736 IPR017441 GO:0005524
Tsu05g03320 1010 SUPERFAMILY L domain-like 371 627 - -
Tsu05g03320 1010 SMART serkin_6 707 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03320 1010 SMART LRR_typ_2 170 194 IPR003591 -
Tsu05g03320 1010 SMART LRR_typ_2 442 466 IPR003591 -
Tsu05g03320 1010 SMART LRR_typ_2 218 242 IPR003591 -
Tsu05g03320 1010 SMART LRR_typ_2 122 146 IPR003591 -
Tsu05g03320 1010 SMART LRR_typ_2 564 587 IPR003591 -
Tsu05g03320 1010 SMART LRR_typ_2 491 514 IPR003591 -
Tsu05g03320 1010 SMART LRR_typ_2 515 539 IPR003591 -
Tsu05g03320 1010 SMART LRR_typ_2 588 613 IPR003591 -
Tsu05g03320 1010 Gene3D Ribonuclease Inhibitor 334 646 IPR032675 -
Tsu05g03320 1010 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Tsu05g03320 1010 PANTHER LRR RECEPTOR-LIKE KINASE 29 1010 - -
Tsu05g03320 1010 ProSiteProfiles Leucine-rich repeat profile. 566 587 IPR001611 GO:0005515
Tsu05g03320 1010 Gene3D Phosphorylase Kinase; domain 1 674 788 - -
Tsu05g03320 1010 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Tsu05g03320 1010 ProSiteProfiles Protein kinase domain profile. 707 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03320 1010 Gene3D Transferase(Phosphotransferase) domain 1 789 1009 - -
Tsu05g03320 1010 Gene3D Ribonuclease Inhibitor 193 333 IPR032675 -
Tsu05g03320 1010 SUPERFAMILY L domain-like 59 369 - -
Tsu05g03320 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Tsu05g03320 1010 SUPERFAMILY Protein kinase-like (PK-like) 689 1003 IPR011009 -
Tsu05g03320 1010 Pfam Protein kinase domain 709 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03320 1010 Pfam Leucine rich repeat 468 528 IPR001611 GO:0005515
Tsu05g03320 1010 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 1010 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03320 Tsu-Chr5 44528073 44531635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03320 30 1007 Receptor kinase-like Gene Family AT3G47570 42.265 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu05g03320 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03320 - - mtr:MTR_1g029940 1296.18