Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03312 ATGTTTAATCTTGAAATACAAGGAGCAACAAAGAGTTTCATGGTGGAATGCAATGTTTTAGGAAAGATTAAGCACCGGAATCTTGTCAAGATCCTAACTTGTTGTTCATGTGTTGATTTAAATAGTAAAGATTTTAAGGCTATTGTTTCCGATTTCATGCCTAATGGGAGTGTAGAAAGCTTGTTGCATGATAATGAAGGGCCTAAAATTCATAATCTTAGCCTCTTACAAATGGTAGACATTGCTCTTGATGTAGCTCATGCATTGGATTTGATTATCTTCACAATGATGGAGAGCAAGTTGTAG 306 0.3529 MFNLEIQGATKSFMVECNVLGKIKHRNLVKILTCCSCVDLNSKDFKAIVSDFMPNGSVESLLHDNEGPKIHNLSLLQMVDIALDVAHALDLIIFTMMESKL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03312 101 PANTHER OS04G0122200 PROTEIN 2 92 - -
Tsu05g03312 101 SUPERFAMILY Protein kinase-like (PK-like) 7 91 IPR011009 -
Tsu05g03312 101 Pfam Protein tyrosine and serine/threonine kinase 10 90 IPR001245 GO:0004672|GO:0006468
Tsu05g03312 101 Gene3D Transferase(Phosphotransferase) domain 1 2 93 - -
Tsu05g03312 101 PANTHER PUTATIVE-RELATED 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03312 Tsu-Chr5 44442149 44442454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03312 1 92 Receptor kinase-like Gene Family AT3G47090 45.833 4.31e-25 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu05g03312 PK_Tyr_Ser-Thr 2.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03312 - - mtr:MTR_1g029940 139.428