Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03291 atgtctGACGCTTTGATCAATGGATTGGCTGGAGCTGGTGGAGGGATCATTGCTCAACTTATTACATACCCTCTTCAAACTGTAAACACTCGTCAACAAACCAATCGTGATCCGAAGGACAAGAAGAATCTTGGAACTTTTCAGCAAATGTGTCAGGTTGTGAAACATGAGGGGTGGGAGCGATTGTATGGAGGCTTGACGCCATCACTTGTCGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACCGAGCTGAAGCAGCAGCTTTAGAGAAGAAAATGCTAGGCACTGGTGATGGATCTGTTGGAATGTTCTCCTCACTTATTGTTGCTGCTTTATCTGgCTGCGTTAACGTGCTCTTGACAAATCCCATATGGCTAGTTGTTACTCGCATGCAGACACATAGAAAAGAGTCGAAGAGAACCCTCAGTGATCCACGGTTGTCAGATGCCATTAACCAAACAACGCTTTCTACTGTTGAGCTTCGTGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTATGATGAAGCTGGTGTTTTAGGTTTCTGGAAGGGTGTATTACCAACATTAGTCATGGTTAGCAACCCTTCCATACAGTTCATGCTGTATGAAACCTTGTTGGCGAAGTTGAAAAAAGGACGTGCTAGTAATAGCGTAACTGCAATAGAGATATTTCTTCTTGGAGCTATCGCTAAGCTTGGAGCTACGGTGGTGACTTATCCTCTTCTTGTTGTCAAGGCAAGGCTTCAAGCTAGGCAGGTTCAAAATGGAGACAAGAGACACCATTATAAAGGTACATGGGATGCTATTATTAAGATGATCCGCTATGAAGGTTTTAATGGATTTTACAAAGGCATGGGGACCAAAATTGTACAAAGTGTTCTAGCTGCAGCTGTTTTGTTTATGGTGAAAGAAGAACTAGTTAAGCAGACTCGTTTCTTGCTTTCCAAGCCAAAGCTTGTGTGA 987 0.4225 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTNRDPKDKKNLGTFQQMCQVVKHEGWERLYGGLTPSLVGTATSQGVYYYFYQIFRNRAEAAALEKKMLGTGDGSVGMFSSLIVAALSGCVNVLLTNPIWLVVTRMQTHRKESKRTLSDPRLSDAINQTTLSTVELRAYGTSHVIQEVYDEAGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKGRASNSVTAIEIFLLGAIAKLGATVVTYPLLVVKARLQARQVQNGDKRHHYKGTWDAIIKMIRYEGFNGFYKGMGTKIVQSVLAAAVLFMVKEELVKQTRFLLSKPKLV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03291 328 Gene3D Mitochondrial carrier domain 5 320 IPR023395 -
Tsu05g03291 328 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 324 IPR044712 GO:0006862|GO:0055085
Tsu05g03291 328 Pfam Mitochondrial carrier protein 7 89 IPR018108 -
Tsu05g03291 328 Pfam Mitochondrial carrier protein 226 314 IPR018108 -
Tsu05g03291 328 Pfam Mitochondrial carrier protein 108 219 IPR018108 -
Tsu05g03291 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 90 IPR018108 -
Tsu05g03291 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 216 IPR018108 -
Tsu05g03291 328 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 324 - -
Tsu05g03291 328 SUPERFAMILY Mitochondrial carrier 3 313 IPR023395 -
Tsu05g03291 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 317 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03291 Tsu-Chr5 44264455 44270304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03291 24 323 Chloroplast and Mitochondria Gene Families AT2G47490 30.065 1.08e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03291 K13354 - gmx:100775784 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03291 05 44264455 44270304 Tsu05g03291 05 44264455 44270304 ECH