Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03272 ATGAGAGAATTGTCCCAAAAATATGGTCCTCTCATGCACCTACAACTTGGTGAGATTTCAACCATTGTGGTTTCTTCTAAAGAAATTGCCAAAGTGGTGTTGAAAACCAATGAAGTTAACTTTGCTCAAAGACCTCGCTCTCTAATTGGTTTAGAAATTATTTCTTATGGTTGCACTGATATTGCTTTTTCACCCTCTGGAGACTATTGGAAGCAACTAAGAAAAATATGCACATTGGAACTATTGAGTGCTAAACGTGTGAAATCATTCCAATCAATTAGGGAAGAAGAGGTGTCAAAATTAATTAGAAATATTTCTATAAACATAGGATCTACTATAAATCTCACACATGAAATATTATCTATGACAAATAGCATAATTTCGAGGGCATCTTTTGGTGATAAATGCAAGGATCAAGAAGCATATATCTTGTTCGTCAAGGAATGTATGAGGTTGGGTGAAAATTTTAGTGTTAGTAATTTGTTTCCCTCCCAACATTGGCTACATGTGATTAGTGGAATGGTGCAAAAATTGAAGATATTGCATAGAAATGGTGACATGGTTCTTGAAAAGATCATCAACAAAGCAACGACAAAGATCGGTGGAGATGGAAGTCTTCTGTCCTATCTTTTGACTCTCAAAGACGACTATTCTTCTAATTTGTCTGGATTTCATTTGACTGTCAATAACATTAAAGCCATTATTCAGGATATGCTTATTGGTGGAAGTGATACATCATCTTTAACTATGGAATGGGCGTTTTCAGAAATGCTGAAAAATCCAAGAGCACTAAAAAGGGCTCAAGAAGAAGTTAGACAAACTTTTAGTAGCAGAGGATTTGTTGATGAAATGGATCTTCAAGAACTGAAATTTCTAAAAGCAGTTATTAAAGAAACCTTAAGATTGCACCCTATTAATCCTATATATTCAAGAGAGTGTATTGAAACTTGTGAGATAAACGGCTACACAATACCAGTTGGAACACAAGTTTTTGTGAATGCATGGGCAATTGGGAGAGACCAAAAGTACTGGATTGAAGGAGAAAAGTTTTATCcagaaagatttctggattgtCCAATTGATTACAAAGGGTCCAATTTTGAGTTCCTACCTTTTGGTGCTGGAAGGAGAATGTGTCCGGGAATATCTTTTGCTGCACGTAATATAGAACTTGCTCTTGCACAACTGCTGTACTATTTTGATTGGGAGTTTCCCATTGGAATAAGccatgaaaattttgaaatgacGGAAGCCTTTGGTGTTAcggtgaaaagaaaaaatgagcTAATTGTAATTCCTTACCTTCCTTGA 1311 0.341 MRELSQKYGPLMHLQLGEISTIVVSSKEIAKVVLKTNEVNFAQRPRSLIGLEIISYGCTDIAFSPSGDYWKQLRKICTLELLSAKRVKSFQSIREEEVSKLIRNISINIGSTINLTHEILSMTNSIISRASFGDKCKDQEAYILFVKECMRLGENFSVSNLFPSQHWLHVISGMVQKLKILHRNGDMVLEKIINKATTKIGGDGSLLSYLLTLKDDYSSNLSGFHLTVNNIKAIIQDMLIGGSDTSSLTMEWAFSEMLKNPRALKRAQEEVRQTFSSRGFVDEMDLQELKFLKAVIKETLRLHPINPIYSRECIETCEINGYTIPVGTQVFVNAWAIGRDQKYWIEGEKFYPERFLDCPIDYKGSNFEFLPFGAGRRMCPGISFAARNIELALAQLLYYFDWEFPIGISHENFEMTEAFGVTVKRKNELIVIPYLP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03272 436 PRINTS E-class P450 group I signature 333 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS E-class P450 group I signature 29 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS E-class P450 group I signature 122 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS E-class P450 group I signature 250 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS E-class P450 group I signature 5 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS E-class P450 group I signature 379 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 SUPERFAMILY Cytochrome P450 1 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 Gene3D Cytochrome P450 1 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS P450 superfamily signature 370 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 372 381 IPR017972 GO:0005506|GO:0016705
Tsu05g03272 436 Pfam Cytochrome P450 1 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g03272 436 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 433 - -
Tsu05g03272 436 PANTHER CYTOCHROME P450 71B11-RELATED 1 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03272 Tsu-Chr5 44057866 44060981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03272 3 433 Cytochrome P450 AT3G26310 41.364 1.96e-117 350