Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03266 ATGGATGGGTCTTTAACTCCAATAGTTAAAGGTGTACAAAACTTGGGGAACAATATCCAATCAAATATTGTGGAACATGGCAGAGAGAGTGTTGTTAATTATATACCGCACATGGAAATGGAATTTGAATCTGAGGTAGCAGCTTATGATTTTTATAATGAGTACAACGAGAAAATGGGGTTCGGTATTCGCCGCGAATATGGAAATAAAAGCAAAATAGATGGAATTCTAACTTCCAGAAGATTCACATGCTTCAAAGAGGGTAAACGAGGTGTTGACAAACGAGATTACTTGACGAAAGACACTAGAGCAGAAACAAGAACCGGATGTCAAGCACGCATGGTTATTTCGCTTGATCGGAAGATTGGAAAATACAAGGTTGTTGACTTTGTTGCTGAACATAATCACATTCTTCAACCGAATGAGTATGTTCATATGATTCGCTCTCATCGACGCATATTCGAGTCTCAAGCATCGCAAATTATATTGGCTGATGAATCTGGACTAAAACCAAAAGATTCCCACGAATATGTGTCCAAGCAAGCCGGTGGAAAAGAAATTATTGGATATACAAGACAAGACCTTAACAATTACCTTCGAACCAAGAGAATGCATACACTAAGGTTTATTTTGAAGTATAATTTGTTTGAGAGACATGTAATGTAA 666 0.3739 MDGSLTPIVKGVQNLGNNIQSNIVEHGRESVVNYIPHMEMEFESEVAAYDFYNEYNEKMGFGIRREYGNKSKIDGILTSRRFTCFKEGKRGVDKRDYLTKDTRAETRTGCQARMVISLDRKIGKYKVVDFVAEHNHILQPNEYVHMIRSHRRIFESQASQIILADESGLKPKDSHEYVSKQAGGKEIIGYTRQDLNNYLRTKRMHTLRFILKYNLFERHVM 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03266 221 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 28 158 - -
Tsu05g03266 221 Pfam FAR1 DNA-binding domain 50 139 IPR004330 -
Tsu05g03266 221 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03266 Tsu-Chr5 43961876 43962541 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g03266 FAR1 3.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03266 - - cam:101500125 288.885