Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03262 ATGGCAAGTATGTTGGGCTTAGGCCAAGGGACAGCAAGAGGTGGGGCGTCATCATCACGAATTGCTGTTTACAAAGCATGTTGGTCTGATGGATGTAAAGAAGTGGACATTCTCGCCGCCTTTGATGATGCTATTGCTGATGGGGTTGACATAATATCAGTCTCAGTTGGAGGAAAGTCAAATCAAAGTATCTATTTTCAAGATGGATTATCGATTGGAGCATTCCATGCGATGAAAAATGGAATATTAACCGTGTTTGCAGCAGGGAACTCAGGTCCACAACGTTCATCTCTAACAAATTTTTCACCTTGGGCGATTGTTGTTGCTGCAAGTACATTAGATAGAAAGTTTGTTACCGAGATCAAATTAGGAGATAACAGAACTTTCGAGGGTTCCTCCTTGAATACATTTGATCTTAAGGGAGAACTGTATCCTATTATCTATGGTGGAGATGCACCAAATATTGAAGCAGGTTTCAATCAAGATTTATCTAGAAATTGCTTAATCGGTTCGTTGGATAACAAATTggttaagggtaaaattgttcTATGTGAAGGAAGCGAAGGAGCCGCAGAGGCCCTTAGAGCAGGAGCTGTTGGTGTCTTGACACAAGGACACAAATTTATGGATGCAACATACTCTTTTCCCTTACCCGGATGTTACCTTCAATCCAACGATGCCGCCAATATACATAAATACATACACTCTACAAGGACTCCAACTGCAACCATCTATAAGACAACTGAGTTCAAAGATAATTTGGCGCCCATGGTTGCCTCTTTCTCTTCAAGGGGTCCAAATAATGCTACACTTGAAATTCTCAAGCCAGATTTAATTGCCCCGGGAGTAAACATTATAGCCAGTTGGTCTCCAATTAGTCCAATTTCTGATACTTCCGGTGAGAGCAGAAAATTGGAGTTCAACATTGTATCAGGAACATCAATGTCATGTCCACATGTGACTGGTGCAGCAGCATACATTAAATCTTTTAATCCTACATGGTCACCTGCCGCTATTCGTTCAGCACTAATGACAAcagCTAAACAAATAAGTCCAGACAATCATGCTGAATTTGCTTATGGAGCTGGTCAAATTGACCCTATCAAGGCTTTGAATCCTGGCTTAGTATATGAGGCAAATGAAGTTGACTACATAAGATTTTTATGTGGTCAAGATTTTAATGCATTAACTTTACAACTAATCACAGGTGAAAAAATCATTTGTTCGGAGATAGCATATACAATGGCACGTGACTTAAATTATCCTTCATTTGCTCTCAAAGCCCCGCATCCTAACCATTATATAAGTGGAAGCTTTAGAAGGACTGTTACAAATGTCGGATCACCAAATTCTACATACATAGCTATTTTGATAGTTTCTAAAGGACTTAATATTTCAGTGAATCCAGATGTTTTGTATTTCACTTCATTGGGAGAAAAACAGACATACGTTCTCActataaatggaaaaataaagaaatctaTCGAGTCGGCTTCTTTGATTTGGGATGATGGTAAATTTCAAGTGAGAAGTCCTGTTGTTGTATTTGATGAACGG 1557 0.3828 MASMLGLGQGTARGGASSSRIAVYKACWSDGCKEVDILAAFDDAIADGVDIISVSVGGKSNQSIYFQDGLSIGAFHAMKNGILTVFAAGNSGPQRSSLTNFSPWAIVVAASTLDRKFVTEIKLGDNRTFEGSSLNTFDLKGELYPIIYGGDAPNIEAGFNQDLSRNCLIGSLDNKLVKGKIVLCEGSEGAAEALRAGAVGVLTQGHKFMDATYSFPLPGCYLQSNDAANIHKYIHSTRTPTATIYKTTEFKDNLAPMVASFSSRGPNNATLEILKPDLIAPGVNIIASWSPISPISDTSGESRKLEFNIVSGTSMSCPHVTGAAAYIKSFNPTWSPAAIRSALMTTAKQISPDNHAEFAYGAGQIDPIKALNPGLVYEANEVDYIRFLCGQDFNALTLQLITGEKIICSEIAYTMARDLNYPSFALKAPHPNHYISGSFRRTVTNVGSPNSTYIAILIVSKGLNISVNPDVLYFTSLGEKQTYVLTINGKIKKSIESASLIWDDGKFQVRSPVVVFDER 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03262 519 PANTHER PUTATIVE-RELATED 2 516 - -
Tsu05g03262 519 SUPERFAMILY Subtilisin-like 2 375 IPR036852 GO:0004252|GO:0006508
Tsu05g03262 519 Pfam Fibronectin type-III domain 418 515 IPR041469 -
Tsu05g03262 519 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 516 IPR045051 -
Tsu05g03262 519 CDD PA_subtilisin_like 121 244 - -
Tsu05g03262 519 ProSitePatterns Serine proteases, subtilase family, serine active site. 312 322 IPR023828 -
Tsu05g03262 519 Gene3D - 114 251 - -
Tsu05g03262 519 Gene3D Peptidase S8/S53 domain 2 384 IPR036852 GO:0004252|GO:0006508
Tsu05g03262 519 Gene3D - 388 517 - -
Tsu05g03262 519 ProSiteProfiles Serine proteases, subtilase domain profile. 1 371 - -
Tsu05g03262 519 Pfam Subtilase family 12 363 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03262 Tsu-Chr5 43912029 43914351 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03262 3 516 Subtilisin-like Serine Gene Family AT5G58830 46.360 1.14e-156 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03262 - - cam:101490875 756.518