Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03258 ATGAACAACGATATTTTATCTCCACGAGACACTACTGGGCATGGGACACATACAGCATCAACAGCAGCCGGAAACCCAGTTAGCATGGCAAGTATGTTGGGCTTAGGCCAAGGGACAGCAAGAGGTGGGGCGTCATCATCACGAATTGCTGTTTACAAAGTATGTTGGTCTGATGGATGTAATGAAGTGGACATTCTCGCCGCCTTTGATGATGCTATTGCTGATGGGGTTGACATAATATCAGTCTCAGTTGGAGCAAAGTCAAATCAAAGTATCTATTTTCAAGATGGATTTTCGATTGGAGCATTCCATGCGATGAAAAATGGAATATTAACTGTGTTTGCAGCAGGGAACTCAGGTCCACAACGTTCATCCCTAACAAATTTTTCACCTTGGGCGATTGTTGTTGCTGCAAGTACATTAGATAGAAAGTTTGTTACCGAGATCAAATTAGGAGATAACAGAATTTTCGAGGGTTCCTCCTTGAATACATTTGATCTTAAGGGAGAACTGTATCCTATTATCTATGGTGGAGATGCTCCAAATATTGAAGCAGGTTTCAATCAAGATTTATCTAGAAATTGCTTAATCGGTTCGTTGGATAACAAATTggttaagggtaaaattgttcTATGTGAAGGAAGCGAAGGAGCCGCAGAGGCCCTTAGAGCAGGGGCTGTTGGTGTCTTGACACAAGGACACAAATTTATGGATGCAACATCTTTTCCCTTACCTGGATGTTACCTTCAATCGAACGATGCCGCAAATATACATAAATACATACACTCTACAAGGACTCCAACTGCAACCATCTATAAGACAACTGAGTTCAAAGATAATTTGGCGCCCATGGTTGCCTCTTTCTCTTCAAGGGGTCCAAATAATGCTACACTTGAAATTCTCAAGCCAGATTTAATTGCTCCTGGAGTAAACATTATAGCTAGTTGGTCTCCAATTAGTCCAATTTCTCATACTTCCGGTGAGAACAGAAAATTGGAGTTCAACATTGTTTCAGGAACATCAATGTCATGTCCACACGTGACTGGTGCAGCAGCATACATTAAATCTTTTAATCCTACGTGGTCACCTGCCGCTATTCGTTCAGCACTAATGACAACagCTAAACAAATAAGTCCAGACAATCATGCTGAATTTGCTTATGGAGCTGGTCAAATTGACCCTATCAAGGCTTTGAATCCTGGCTTAGTATATGAGGCAAATGAAGTTGACTACATAAGATTTTTATGTGGCCAAGATTTTAATGCATTAACTTTACAACTAATCACCGGCGACAAAATCATTTGTTCAGAGATAGCATATACAACGGCACGTGACTTAAATTATCCTTCATTTGCTCTCAAAGCCCCGCATCCTAACCATTATATAAGTGGAAGCTTTAGAAGGACCGTTACAAATGTTGGATCACCAAATTCTACATACATAGCTATTTTGATAGTTTCTAAAGGACTTAATATTTCAGTGAATCCAGATGTTTTGTATTTCACTTCATTGGGAGAAAAACAGACATACGTTCTCACTATAAATGGAAAGATAAAGAAATCTATCGAATCGGCTTCTTTGATTTGGGATGATGGTAAATTTCAAGTGAGAAGTCCTGTTGTTGTATTTGATGAACGGGCAGAAAAAGGAAATGAGAGAACTGAGTTGAAGTCTGACACACCAGTTATCTCCCCCAAGACTCCCCTTAAGGTGGATTAA 1719 0.3933 MNNDILSPRDTTGHGTHTASTAAGNPVSMASMLGLGQGTARGGASSSRIAVYKVCWSDGCNEVDILAAFDDAIADGVDIISVSVGAKSNQSIYFQDGFSIGAFHAMKNGILTVFAAGNSGPQRSSLTNFSPWAIVVAASTLDRKFVTEIKLGDNRIFEGSSLNTFDLKGELYPIIYGGDAPNIEAGFNQDLSRNCLIGSLDNKLVKGKIVLCEGSEGAAEALRAGAVGVLTQGHKFMDATSFPLPGCYLQSNDAANIHKYIHSTRTPTATIYKTTEFKDNLAPMVASFSSRGPNNATLEILKPDLIAPGVNIIASWSPISPISHTSGENRKLEFNIVSGTSMSCPHVTGAAAYIKSFNPTWSPAAIRSALMTTAKQISPDNHAEFAYGAGQIDPIKALNPGLVYEANEVDYIRFLCGQDFNALTLQLITGDKIICSEIAYTTARDLNYPSFALKAPHPNHYISGSFRRTVTNVGSPNSTYIAILIVSKGLNISVNPDVLYFTSLGEKQTYVLTINGKIKKSIESASLIWDDGKFQVRSPVVVFDERAEKGNERTELKSDTPVISPKTPLKVD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03258 572 MobiDBLite consensus disorder prediction 548 572 - -
Tsu05g03258 572 SUPERFAMILY Subtilisin-like 3 399 IPR036852 GO:0004252|GO:0006508
Tsu05g03258 572 Gene3D - 142 278 - -
Tsu05g03258 572 Gene3D - 415 544 - -
Tsu05g03258 572 Gene3D Peptidase S8/S53 domain 3 411 IPR036852 GO:0004252|GO:0006508
Tsu05g03258 572 MobiDBLite consensus disorder prediction 1 24 - -
Tsu05g03258 572 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 544 IPR045051 -
Tsu05g03258 572 Pfam Subtilase family 9 390 IPR000209 GO:0006508|GO:0008236
Tsu05g03258 572 PANTHER PUTATIVE-RELATED 3 544 - -
Tsu05g03258 572 PRINTS Subtilisin serine protease family (S8) signature 338 354 IPR015500 -
Tsu05g03258 572 PRINTS Subtilisin serine protease family (S8) signature 10 23 IPR015500 -
Tsu05g03258 572 CDD PA_subtilisin_like 149 271 - -
Tsu05g03258 572 ProSitePatterns Serine proteases, subtilase family, serine active site. 339 349 IPR023828 -
Tsu05g03258 572 Pfam Fibronectin type-III domain 445 542 IPR041469 -
Tsu05g03258 572 ProSiteProfiles Serine proteases, subtilase domain profile. 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03258 Tsu-Chr5 43879133 43882700 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03258 9 543 Subtilisin-like Serine Gene Family AT5G58830 46.961 7.86e-166 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03258 - - cam:101490875 797.349