Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03220 ATGGGAGACGCAATTGATTTGTCTGGGGATGGAGGAGTCATCAAGACTATTGTGAGGAAGAGCAAGTCAGATGCTGTGGCTCCCACAGAAGATTTTCCTGTTGTTGATGTACACTATGAAGGCACGCTCGCTGATACCGGTGAAGTCTTTGACACTACACATGAAGACAACACTATATTCTCCTTTGAAGTTGGAAAGGGTAGTGTTATCAAGGCTTGGGACATTGCAGTCAAAACTATGAAGGTTGGAGaaattgcaaaaataatatgCAAGCCAGACTATGCATATGGTAGCGCAGGATCTCCGCCAGATATACCCCCAGATGCAACACTTGTTTTTGAAGTTGAGCTAGTTGCCTGTCGGCCAAGGAAAGGCTCAACTACCGGAAGTGTTTCTGAGGAGAGGGCTAGGCTGGAGTAA 420 0.45 MGDAIDLSGDGGVIKTIVRKSKSDAVAPTEDFPVVDVHYEGTLADTGEVFDTTHEDNTIFSFEVGKGSVIKAWDIAVKTMKVGEIAKIICKPDYAYGSAGSPPDIPPDATLVFEVELVACRPRKGSTTGSVSEERARLE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03220 139 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Tsu05g03220 139 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Tsu05g03220 139 Gene3D - 3 120 IPR046357 GO:0003755
Tsu05g03220 139 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 1 139 - -
Tsu05g03220 139 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 139 - -
Tsu05g03220 139 SUPERFAMILY FKBP-like 9 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03220 Tsu-Chr5 43448981 43452599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03220 5 133 Calmodulin-binding Proteins AT5G48570 33.582 4.39e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03220 K01802 - gmx:100500018 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03220 05 43448981 43452599 Tsu05g03220 05 43448981 43452599 ECH