Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03214 ATGAGACTACTAGTTGTTGCCTTGTGCCTTCTCTTCTTATTCTTGCATTTGTATTCTGTTTCTGCACTAAACTCAGATGGATTGGCACTCTTATCATTCATGTCTCACTGGACATTTGTTCCTCCTCGGATAAACTCCACATGGATTCCATCTCATTCCACACCATGTTCATGGGAGGGTGTCCAATGCGACACTGCAACCCGGCGTGTAGTCTCTCTCAACCTTTCCTATTATCACATTCCCGGTCAACTACGACCTGAGATTGCTAATTGCACACAACTCAAAGACTTAGACCTTTCTTATAACTACTTTACAGGCCAAATACCTCACTCATTCAATAATCTTCACAAACTCACCTTACTCGATCTCTCTATTAATCTTCTCACCGGTTCCATTCCAACTAGTATTGGCAACATGACTCAACTTCGCTACTTGTATCTCCAAAATAACACCTTGTCTGGTACAATTCCTTCAACCATTGGGAACTGCACTCAACTGCAAGAATTGTTTTTGAACTTTAATCAGTTCCAGGGTGTCATTCCCCACACTCTCAATACCAATCTTCTTCGTTTTGATGTTGCCGGTAATAAACTAACAGGTACCATTCCATTTGGTAGCTCTTCTGGTTGTCAAAATTTACTGTTTTTGGATATCTCATTCAATTTCTTTAGTGGAGGCATTCCCTCAGCCATTGGGAATTGTACTTCTTTATCACAATTTGCTGCTGTCCGATGTAACTTGGTTGGAACTATTCCATCCTCTATCGGTCTTCTCACCAAGCTTTCAATTCTACACCTTCCTGAGAACCATTTGTCTGGAAAAATACCACCCGAAATAGGTAACTGCAAGTCTTTGAATCATTTGCACTTGTATTCCAATCAACTTGATGGAAACATTCCAACTGAATTGGAGAAGCTGAGTCAACTGAAGAACCTTGAGCTGTTTTCCAATCAATTGCGCGGTGAAATTCCACTTGGCATATGGAAGATCCAAAGTCTTGAACATCTACTTGTGTATAATAATAGCCTTTCTGGTGAACTTCCTGTCGAGATGACAGAGCTCAAGAATCTCAAAAACATAACATTGTTTAACAACATGTTCTCTGGAGTCATACCTCAAAGCTTAGGAATTAATAGCACTTTGTTGCTGTTAGACTTTACAAATAACAGGTTCACCGGGAACATCCCACCAAATCTTTGTTTTGGCAGAAAGTTAAGCATTTTGAATATGGCCATCAATCAACTTCAAGGTACCATACCTCGTGATGTCGGAAGATGCACAACTCTAACTAGGGTCATTCTTAAACAAAACAACTTAGTTGGGCCTCTACCTGATTTTGATACCAATACCAATCTCTTATACATGGATATCACCAACAATAAAATCAACGGTTCAATTCCATCAAGTTTAGGAAACTGCAAAAATCTCACCGATTTAATTTTTCCTATGAACAAATTTAGCGGTCCAATACCATCAGAGATAGGAAACCTTGTGAACCTTAGGACTTTGGTTCTTGCTCACAACAACTTAGAAGGTCCTTTGCCATTTCAGCTGTCAAACTGTACCAAAATGGACAAGTTTGACGTCggatttaatttcttaaatggTTCTTTGCCATCAAGTTTGCAGAAATGGACAAGGCTAAACACACTAATTTTGAGTGAGAATCGTTTTAGTGGTGGCATTCCTAGTTTCTTTTCGGCATTTAACTATCTTTCAGAACTACAgcttgggggcaatttgtttgGAGGGAGGATTCCTAGATCGGTTGGGGCATTGCAGAATTTGATCTATGGGTTAAATCTAAGTTCTAATGGACTGATGGGAGACATACCTGTGGAAATCGGAAAACTGAAAACTTTGCAAATGCTGGATCTGTCTCAGAACAATTTGACAGGAAGCATACAAGTTCTTGATGAACTCCCTTCATTGGTTCAAATCAATATTTCATATAATTCTTTTCAAGGTCTCATACCAAAGAGTCTAATGAAGCTGCTTAATTCTCCCTTGTCATCATTTTTGCGGAATCCTGAGCTATGTATCAGTTGTTCGCCATCCGATGGTTTGGTTTGCTCCAAAAGCAGCAGCCATCTAAAACCATGTGAAAACAAAACAGTGAAACACAAAGGCCTCGGCAAAACTGCAATTGTGATGATAGCTTTAGGATCCtcaatatttgttgtttttctgTTGATGGGATTAGTATATATCTTTGTCTATGGCAGAAAATCTAATCAACAAATCCATATTACTGATAACGGCAGTCCTTCGTCCCTTTTTAACGAAGTCCTGAAGGCTACATCGAACCTAAGTGATCAGTATATTATTGGCAGGGGAGCCCATGGAGTTGTTTATAAAGCCCTTGTAAGTCAAGACAAAGTTTTTGCTGTAAAGAAGCTAGCATTTGCTGCTACCAGCAAAGGTAAGAAAACGAGCATGATCAGAGAAATTCAAACCCTTGGACATGTTAGGCATCGAAATCTTGTGAAATTGGAAGAGTTTTGGTTCGGACAAGATTATGGTCTAATTCTGTATAGATACATGCAAAATGGAAGCCTTTATGATGTATTGCATGAAAAGAAACCAGCGCCGTCCTTAGAGTGGAATGTCCGGTATAGGATAGCTGTTGGAATTGCTCATGGGTTGGCTTATCTCCATTATGAATGTGATCCTCCCATATTGCACCGAGATATCAAACCAAGCAACATACTTTTAGACTCTGATATGGAGCCTCACATTACTGACTTTGGTATCGCCAAACTTTTGGACCAGtcttttacatcaaatccttcCTTATCTGTGCCGGGCACAATTGGTTATATTGCGCCagAGAATGCTTATACAACAAGAAGTAGTAGGGAGTGTGACGTGTACAGTTATGGCGTAGTTTTGCTTGAGCTGATAATCAGAAAGAAGGTAGCAGATCCATTATTTATGGAGGGTACTGATATAGTGGGTTGGGTTAGATTTTTGTGGAGTGAAACAGAAGAAATTAACCAAATTGTTGATTCAAGCCTTGCAAATGAATGTGTAGATACCAATATAATGGAAAATATTACCAAAGTGCTTATGCTAGCTTTGAGATGCACCGAGAAGGATCCACACAAGAGACCCACAATGAGAGATGTTACCAAGCAATTATCAGATTCTAATTCACAGAAAATAAGTAGAAACTGCAGATATGTAAAGCCATATCAGCATTACGCGTCAAAGGGATATTAA 3222 0.3849 MRLLVVALCLLFLFLHLYSVSALNSDGLALLSFMSHWTFVPPRINSTWIPSHSTPCSWEGVQCDTATRRVVSLNLSYYHIPGQLRPEIANCTQLKDLDLSYNYFTGQIPHSFNNLHKLTLLDLSINLLTGSIPTSIGNMTQLRYLYLQNNTLSGTIPSTIGNCTQLQELFLNFNQFQGVIPHTLNTNLLRFDVAGNKLTGTIPFGSSSGCQNLLFLDISFNFFSGGIPSAIGNCTSLSQFAAVRCNLVGTIPSSIGLLTKLSILHLPENHLSGKIPPEIGNCKSLNHLHLYSNQLDGNIPTELEKLSQLKNLELFSNQLRGEIPLGIWKIQSLEHLLVYNNSLSGELPVEMTELKNLKNITLFNNMFSGVIPQSLGINSTLLLLDFTNNRFTGNIPPNLCFGRKLSILNMAINQLQGTIPRDVGRCTTLTRVILKQNNLVGPLPDFDTNTNLLYMDITNNKINGSIPSSLGNCKNLTDLIFPMNKFSGPIPSEIGNLVNLRTLVLAHNNLEGPLPFQLSNCTKMDKFDVGFNFLNGSLPSSLQKWTRLNTLILSENRFSGGIPSFFSAFNYLSELQLGGNLFGGRIPRSVGALQNLIYGLNLSSNGLMGDIPVEIGKLKTLQMLDLSQNNLTGSIQVLDELPSLVQINISYNSFQGLIPKSLMKLLNSPLSSFLRNPELCISCSPSDGLVCSKSSSHLKPCENKTVKHKGLGKTAIVMIALGSSIFVVFLLMGLVYIFVYGRKSNQQIHITDNGSPSSLFNEVLKATSNLSDQYIIGRGAHGVVYKALVSQDKVFAVKKLAFAATSKGKKTSMIREIQTLGHVRHRNLVKLEEFWFGQDYGLILYRYMQNGSLYDVLHEKKPAPSLEWNVRYRIAVGIAHGLAYLHYECDPPILHRDIKPSNILLDSDMEPHITDFGIAKLLDQSFTSNPSLSVPGTIGYIAPENAYTTRSSRECDVYSYGVVLLELIIRKKVADPLFMEGTDIVGWVRFLWSETEEINQIVDSSLANECVDTNIMENITKVLMLALRCTEKDPHKRPTMRDVTKQLSDSNSQKISRNCRYVKPYQHYASKGY 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03214 1073 Pfam Protein kinase domain 774 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03214 1073 ProSiteProfiles Protein kinase domain profile. 770 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03214 1073 Gene3D Ribonuclease Inhibitor 186 447 IPR032675 -
Tsu05g03214 1073 SUPERFAMILY Protein kinase-like (PK-like) 748 1047 IPR011009 -
Tsu05g03214 1073 SUPERFAMILY RNI-like 361 672 - -
Tsu05g03214 1073 Gene3D Ribonuclease Inhibitor 23 185 IPR032675 -
Tsu05g03214 1073 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 235 - -
Tsu05g03214 1073 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 249 1054 - -
Tsu05g03214 1073 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Tsu05g03214 1073 ProSitePatterns Protein kinases ATP-binding region signature. 776 799 IPR017441 GO:0005524
Tsu05g03214 1073 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Tsu05g03214 1073 SUPERFAMILY L domain-like 53 396 - -
Tsu05g03214 1073 ProSiteProfiles Leucine-rich repeat profile. 620 642 IPR001611 GO:0005515
Tsu05g03214 1073 SMART LRR_typ_2 497 521 IPR003591 -
Tsu05g03214 1073 SMART LRR_typ_2 115 138 IPR003591 -
Tsu05g03214 1073 SMART LRR_typ_2 139 163 IPR003591 -
Tsu05g03214 1073 SMART LRR_typ_2 306 330 IPR003591 -
Tsu05g03214 1073 SMART LRR_typ_2 258 282 IPR003591 -
Tsu05g03214 1073 SMART LRR_typ_2 641 664 IPR003591 -
Tsu05g03214 1073 PANTHER OS08G0446200 PROTEIN 249 1054 - -
Tsu05g03214 1073 Gene3D Phosphorylase Kinase; domain 1 738 847 - -
Tsu05g03214 1073 SMART serkin_6 770 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03214 1073 Gene3D Transferase(Phosphotransferase) domain 1 848 1066 - -
Tsu05g03214 1073 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Tsu05g03214 1073 PANTHER OS08G0446200 PROTEIN 9 235 - -
Tsu05g03214 1073 Gene3D Ribonuclease Inhibitor 448 707 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03214 Tsu-Chr5 43319923 43323226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03214 16 1059 Receptor kinase-like Gene Family AT1G73080 49.548 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu05g03214 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03214 - - gmx:100778035 1479.92