Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03206 ATGGCAATTGGGTTCATGGAAGTACATCTTGTCAAAGCTAAAGGCCTCAATGGAACATGTTTCTTTGGTGGAATGGAAGATCCCTATGTTTTGATACAATATCAAGGACAAGAGAAGAGGAGCAATGTTGCTAAAGGTAGAGGAAGAAATCATGTATGGgatgaaaaatttatattcaaagTAGAAAATCATGGATCAAGTGATAAAAACAAActcattttcaaaataatgGACAAAGACACATTTTCTGCTGATGACTTCATTGGACAAGCCATAATCTATGTAAAGGATTTATTGGTTGAAGGTGAACAAAATGGAGTTGCTAAGCTACCACCTCTTAAATATAGAGTGATTCGTGCTAATCAATCTTATCGTGGAGAAATTGATGTTGCCATTACTTTTACTCCAAAGGTGgaagatgaattaattgaagaAGACATAGGAGGATGGAAAGAAAGTGACTACTATCTATCTTAG 477 0.3229 MAIGFMEVHLVKAKGLNGTCFFGGMEDPYVLIQYQGQEKRSNVAKGRGRNHVWDEKFIFKVENHGSSDKNKLIFKIMDKDTFSADDFIGQAIIYVKDLLVEGEQNGVAKLPPLKYRVIRANQSYRGEIDVAITFTPKVEDELIEEDIGGWKESDYYLS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03206 158 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Tsu05g03206 158 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 154 - -
Tsu05g03206 158 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 138 IPR035892 -
Tsu05g03206 158 Pfam C2 domain 6 104 IPR000008 -
Tsu05g03206 158 PANTHER C2 DOMAIN-CONTAINING 1 154 - -
Tsu05g03206 158 SMART C2_3c 5 107 IPR000008 -
Tsu05g03206 158 Gene3D C2 domain 2 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03206 Tsu-Chr5 43246410 43248096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03206 3 102 C2H2 Transcription Factor Family AT4G21160 33.663 1.90e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03206 - - gmx:100791344 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03206 05 43246410 43248096 Tsu05g03206 05 43246410 43248096 ECH