Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03189 ATGGCCAAAAAATGTGAAGGACTTGCTGTGGGAATATACCTTGGCACAACGTATTCATGCGTTGCTGTATGGCAGGAGCAACACTGTCGAGTTGAGATCATTCACAATGACCATGGCAACAGAACAACACcttcttttgttgttttcacTAAAGAACAAAGGTTGATTGGTGATGCTGCTAAAAATCAAGTTGCTGCAAATCCTCAAAACACTGTTTTTgaTGCAAAGAGGTTAATTGGTAGGAAGTTTAGTGATCAAGTTGTTCAAGATGATATAATGTTGTGGCCATTCAAGGTGATTGCTAGTGTCAATGACAAACCAATGATTACTGTCACGTTCAAGGGCCAGGAGAAGAAGCTCTGTGCAGAAGAAGTGTCATCTATGGTACTCACAAAGATGCGAGAAATTGCGGAGGTGTATTTAGAATCATCTGTTACAAATGCAGTTGTTATTGTCCCTGCTTATTTTAGTGATTCTCAGCGAAAAGCTACCGTAGATGCTGGTGTTATTGCTGGCCTCAATGTTATCAGGGTATTGAATGAACCAACTGCTGCAGCTATTGCATATGGCCTTGATAAGAGAACTAATTGTGTTGgagaaagaaatatttttgtctttgatcTTGGTGGTGGCACTTTTGATGTGTCTCTCCTAACGATTAAGGATAATGTCTTCCAAGTTAAAGCAACTGCTGCAAATACTCACCTTGGTGGAGAGGACTTTGATAACAGAATGGTGAACTACTTTGTGCAAGAGTTTAAGAGAAAGAACAAAGTGGACATTGGTGTGAATCCAAGGGCCTTAAGGAGGTTGAGAACAACTTGTGACAGAGCTAAAAGATCACTTTCTTTCCTTGTTGTCTCAACTATTGAAATTGATTCTTTATGTGAAGGCATTGATTTCTCTTCATCAATCAATCGTGCCAAGTTTGAAGAAATGAATATGGATATTTTCGAGGAGTGCATGAAGATTGCTGAGAGTTGTCTTATAGATGCTAACTTGGACAAGAGTAAGGTTGATGATATTGTCCTTGTTGGAGGATGTTCTAGGATTCCTAAAGTGCAGCAGCTGTTACAAGAATTTTTCAAAGGGAAGGAGTTGTGCAAGGGCATTAACCCTGATGAGGCTGTAGCTTACGGGGCAGCTGTTCAAGCTGCTTTGTTAAGCCGTGACATTAAGAATGTTCCAAAGTTGGTGTTGCAGGATGTTACACCTTTGTCTCTAGGTAGGAAAGTATTGGGAGATATCATGCATGTGGTGATTCCTAGAAGCACTTGCATTCCTGTCAAGAAGACCGAAGAATATGTTACAGCTATTGATGACCAAACCAGTTACCGTATTGAGGACATGAAATTCCTAACAAAGGCTGAAGCTGTGAATGCATTGGATGATTACATTTACAAAATGAGAAATACTTTAAAGAAAGAGGATATTAATTTGAAGTTCTCTGCTGTACATGTTGGCGACTCGTTACTTCAGAGAGACAACTCGAACAAAAAGGGATGCCAAGAATTTAGCTTCTCGTTCCATTATTCTTTCATTCATTGGATTGTGGAACATCTATATGATAATGAATATGTCTTGCCCGTAAAGGATATTGCACAGTCTCATAAGCATCTTCAGGAGTTAGATGGCAAAGACATTGTCAATGTTGTGGCTACCGATAATATGATTCAGATTGAAATTGTATATCATGAGCCTGAACCAAATATTTCCAAATATCAACAACTTGAGATACCAACACATGAACCAATCCCAGAAGCCACCAAATCATCAAATGGGTTTCAGCAACCAAATGTTGCACTTCCTATTGATAATGTTATTAGTGCAAAAAAGCGGCGAAGGAACAATTACAAGGCTAATAAGAGGGTGCAGTTGGCTGTTGCTCAgtaa 1893 0.3851 MAKKCEGLAVGIYLGTTYSCVAVWQEQHCRVEIIHNDHGNRTTPSFVVFTKEQRLIGDAAKNQVAANPQNTVFDAKRLIGRKFSDQVVQDDIMLWPFKVIASVNDKPMITVTFKGQEKKLCAEEVSSMVLTKMREIAEVYLESSVTNAVVIVPAYFSDSQRKATVDAGVIAGLNVIRVLNEPTAAAIAYGLDKRTNCVGERNIFVFDLGGGTFDVSLLTIKDNVFQVKATAANTHLGGEDFDNRMVNYFVQEFKRKNKVDIGVNPRALRRLRTTCDRAKRSLSFLVVSTIEIDSLCEGIDFSSSINRAKFEEMNMDIFEECMKIAESCLIDANLDKSKVDDIVLVGGCSRIPKVQQLLQEFFKGKELCKGINPDEAVAYGAAVQAALLSRDIKNVPKLVLQDVTPLSLGRKVLGDIMHVVIPRSTCIPVKKTEEYVTAIDDQTSYRIEDMKFLTKAEAVNALDDYIYKMRNTLKKEDINLKFSAVHVGDSLLQRDNSNKKGCQEFSFSFHYSFIHWIVEHLYDNEYVLPVKDIAQSHKHLQELDGKDIVNVVATDNMIQIEIVYHEPEPNISKYQQLEIPTHEPIPEATKSSNGFQQPNVALPIDNVISAKKRRRNNYKANKRVQLAVAQ 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03189 630 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Tsu05g03189 630 Gene3D - 10 386 - -
Tsu05g03189 630 PANTHER HEAT SHOCK PROTEIN 70KDA 439 485 IPR013126 GO:0005524|GO:0140662
Tsu05g03189 630 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 443 - -
Tsu05g03189 630 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 398 448 IPR029047 -
Tsu05g03189 630 PANTHER HEAT SHOCK PROTEIN 70KDA 4 443 IPR013126 GO:0005524|GO:0140662
Tsu05g03189 630 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Tsu05g03189 630 PANTHER HEAT SHOCK 70 KDA PROTEIN 439 485 - -
Tsu05g03189 630 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Tsu05g03189 630 PRINTS 70kDa heat shock protein signature 397 416 - -
Tsu05g03189 630 PRINTS 70kDa heat shock protein signature 211 221 - -
Tsu05g03189 630 PRINTS 70kDa heat shock protein signature 148 168 - -
Tsu05g03189 630 PRINTS 70kDa heat shock protein signature 38 50 - -
Tsu05g03189 630 PRINTS 70kDa heat shock protein signature 371 391 - -
Tsu05g03189 630 PRINTS 70kDa heat shock protein signature 8 21 - -
Tsu05g03189 630 PRINTS 70kDa heat shock protein signature 60 68 - -
Tsu05g03189 630 PRINTS 70kDa heat shock protein signature 339 355 - -
Tsu05g03189 630 Gene3D - 194 368 - -
Tsu05g03189 630 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 388 448 IPR029047 -
Tsu05g03189 630 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Tsu05g03189 630 Pfam Hsp70 protein 9 448 IPR013126 GO:0005524|GO:0140662
Tsu05g03189 630 Gene3D - 73 128 - -
Tsu05g03189 630 Gene3D Actin; Chain A, domain 4 237 320 - -
Tsu05g03189 630 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03189 Tsu-Chr5 43100312 43106735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03189 1 448 Calmodulin-binding Proteins AT3G12580 68.597 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03189 K03283 - gmx:102667578 683.715