Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03156 ATGAGAGCTACACAGTTTCAATATGACTTGAAAACAAAATCAGGAGGAACATCACTACAACAAAATTGGCTTGTAGCTTCAAAAATATTTGCGTCTGCCACGACGCTGACGCTACTAGCtGTGAAAATCCCTAAATCCGCCGAATCCGTTCGCCGTCTAAGAACAATCCCTCCGCCGAATCCGTCCGCCATCGAAGAACAATTTCTCAGCGCATCTCTCCTTCAATCCTTCCTCCGTCGAAGAACAATCCCTCTGCCGTTCTCCTTCAATCACTCCGCTGTTCTCCGTCGTTCTCCTCGGTTCCAAGCGGGTGACAATGTCAAAACTGCAAAAACAATTGCTGTTGAATGTGGAATACTTGGTTCACTTGTTGATGCTACCGAGAGAAGTGTCATCGAAGGAAAAACATTCCGAGCCTTGTCAAATTCAGAGAGAGAAGAAATTGTGGACTCGATATCTGTTATGGGAAGGAGGAAGGGTCATGTGGCTGTAACTGGGGATGGAACGAATGATGCTCCAACACTTCACAAGGCGTATATCGGTCTTGCAATGGTTTTGCTGGTACATAATTGTGAAGAGAAAGCAAACATAGTGAGAAAATCCCTAATCCTTGAATCCTTATTCAGTCGATTCTTCTACGGTCGAAGAACCAGAATCCCTCAATCTCTATGTCTCACCTTCAATCCCTCCTTCGTTGAAGAAGTAATAATCACGAATACTTCTCTCAACTCGCTAATTCTCTCCGTCGTTCACTCCTCCTACAAATGGTAA 771 0.4449 MRATQFQYDLKTKSGGTSLQQNWLVASKIFASATTLTLLAVKIPKSAESVRRLRTIPPPNPSAIEEQFLSASLLQSFLRRRTIPLPFSFNHSAVLRRSPRFQAGDNVKTAKTIAVECGILGSLVDATERSVIEGKTFRALSNSEREEIVDSISVMGRRKGHVAVTGDGTNDAPTLHKAYIGLAMVLLVHNCEEKANIVRKSLILESLFSRFFYGRRTRIPQSLCLTFNPSFVEEVIITNTSLNSLILSVVHSSYKW 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03156 256 SUPERFAMILY HAD-like 104 184 IPR036412 -
Tsu05g03156 256 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 100 206 - -
Tsu05g03156 256 Gene3D - 97 199 IPR023214 -
Tsu05g03156 256 PANTHER CATION TRANSPORTING ATPASE 100 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03156 Tsu-Chr5 42540700 42543271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03156 100 215 Primary Pumps ATPases AT4G29900 48.485 2.93e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03156 K01537 - gmx:100820121 116.316