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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Tsu05g03154
ATGGAGAATACCAGAGGCGTGAGAAAAGGTGCGTGGACATATGAGGAAGATAAGCTACTCAAGAATTGCATTAACAATTATGGTGAAGGAAAGTGGCATTTAGTTCCTCAAAGAGCAGGATTGAATAGGTGCCGAAAAAGTTGTAGATTGAGGTGGTTAAATTATTTAAACCCTACAATTAATAGAGAAAGTTTTTCTGAGGATGAAGTTGATATGATTTTAAGGTTACACAAACTCCTCGGAAACAGATGGTCACTAATTGCTGCAAGACTTCCGGGTAGAACAGCTAATGATGTGAAGAACTATTGGCACACACACTTGCGCAAGAAGGTAGTACCaagaaaaatagaagaaaaaaagaaacctTTAGAAATTACCATGAAAACTCACGAAGTTATTAAACCTCAGCCTCGAACTTTTTCATCTCATTCACTTAGGTTAAATGAGAAACATAACAATTATGTGAAACCAATTGTGACGGTGTCGACAAAAGATGTAACTGTAGCTAAAGATGGTGACAAAGAGTGTACTATGCTACCAATTGATGGTGATGGAGATAGTGCTGCACAACCATATGCTGAAAATTCCACAATGTCTACCAAGTGGTGGGAGAGTTTGTTAAATGAGAGCAGTGACAAGATTGGTTCATGCACTTTGTTACAAGAGAAGGAATATTCCAATTTAGAGTTTGCAAATGTTGAGAAATTTTTGAATCAAGACTCCGATATTAATCTTTTCGTGTTCTGTTTGTTTTTCGTCGGGTTGGATCGACTTCCTTGTTGGTTTGTTATGGCTCGTGCTCTGGCGGAGGTGGTGGTTTTGTACCTCATTGCTTATCACTCACTTGCCTTTGTCACAATCGGTGGCAAATCTGGCTGTGTTTTGGTGTTTGGATCCGGTAGTTTGAAGTAG
912
0.3816
MENTRGVRKGAWTYEEDKLLKNCINNYGEGKWHLVPQRAGLNRCRKSCRLRWLNYLNPTINRESFSEDEVDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHTHLRKKVVPRKIEEKKKPLEITMKTHEVIKPQPRTFSSHSLRLNEKHNNYVKPIVTVSTKDVTVAKDGDKECTMLPIDGDGDSAAQPYAENSTMSTKWWESLLNESSDKIGSCTLLQEKEYSNLEFANVEKFLNQDSDINLFVFCLFFVGLDRLPCWFVMARALAEVVVLYLIAYHSLAFVTIGGKSGCVLVFGSGSLK
303
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Tsu05g03154
303
PANTHER
TRANSCRIPTION FACTOR MYB8-RELATED-RELATED
5
161
-
-
Tsu05g03154
303
Gene3D
-
63
134
-
-
Tsu05g03154
303
PANTHER
TRANSCRIPTION FACTOR MYB113-RELATED
5
161
-
-
Tsu05g03154
303
SMART
sant
8
58
IPR001005
-
Tsu05g03154
303
SMART
sant
61
109
IPR001005
-
Tsu05g03154
303
ProSiteProfiles
Myb-like domain profile.
4
56
IPR001005
-
Tsu05g03154
303
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
57
111
IPR017930
-
Tsu05g03154
303
ProSiteProfiles
Myb-like domain profile.
57
107
IPR001005
-
Tsu05g03154
303
CDD
SANT
64
107
IPR001005
-
Tsu05g03154
303
Pfam
Myb-like DNA-binding domain
62
107
IPR001005
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Tsu05g03154
Tsu-Chr5
42400828
42461305
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Tsu05g03154
2
207
MYB Transcription Factor Family
AT1G66370
49.345
4.36e-60
190
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB
Tsu05g03154
Myb_DNA-binding
6.7e-16
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Tsu05g03154
-
K16166
mtr:MTR_5g078860
298.901
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