Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03147 ATGACGAAAGAAGACTCTCCTGTTGCTGGATATATTGCGGCCATTGTGTTCGGCACTATCGTTTTGTGCTTACTGATTGGATTTTTCCTTGCCTGGCTGCGTCGTAAATTGGAAAATCGATTGTTAAGCCAGAATCCAAACACTGCACCGAACACTCAGAGCGTAGTTATAcaagttgtttccataaatgaTTTGAAGAGCATGACGAATGATTTCAACGAGGAAAATATATTGGGAATAGGAGGTTCCGACATAGTTTATGAGGGTAAACTCAATGACGATACTACGGTCGCAGTAAAGAGAATAAATGTTAGACAATTAGTAGGTAGCAGTGCAAGTGCAGTCGAGTTTGAGGCTGAATTTGCTGTTTTAAAAGAGGACTACATGCCTCAGTGGAACCTATGTAAACATCTTTTTAGATGGAGCGACGAAGGATTCCCACCACTCCAGTGGAATAGGAGGTTGATGATTGCCTTAGACGTGGCAAATGGTGTCGAGTATCTTCATGATTTGGCTCAGGATCGCTTCATTCACAGAGACTTGAAGCCTTCAAATATTCTTCTCGGAAATGATATGACGGCAAATGTTGCAGATTTCAGTCTATCTATTCTTGCTCCAAAAGAGAATGTCTCAATGGAAGCAAAGCTTGGAGGAACTTTTGGATATGTGGCGCAAGAACACACAGATATTTGA 693 0.4055 MTKEDSPVAGYIAAIVFGTIVLCLLIGFFLAWLRRKLENRLLSQNPNTAPNTQSVVIQVVSINDLKSMTNDFNEENILGIGGSDIVYEGKLNDDTTVAVKRINVRQLVGSSASAVEFEAEFAVLKEDYMPQWNLCKHLFRWSDEGFPPLQWNRRLMIALDVANGVEYLHDLAQDRFIHRDLKPSNILLGNDMTANVADFSLSILAPKENVSMEAKLGGTFGYVAQEHTDI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03147 230 Pfam Protein kinase domain 152 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03147 230 SUPERFAMILY Protein kinase-like (PK-like) 50 226 IPR011009 -
Tsu05g03147 230 ProSiteProfiles Protein kinase domain profile. 6 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03147 230 SMART tyrkin_6 72 230 IPR020635 GO:0004713|GO:0006468
Tsu05g03147 230 Gene3D Transferase(Phosphotransferase) domain 1 133 229 - -
Tsu05g03147 230 PANTHER OSJNBA0070M12.3 PROTEIN 8 226 - -
Tsu05g03147 230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Tsu05g03147 230 Gene3D Phosphorylase Kinase; domain 1 34 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03147 Tsu-Chr5 42303402 42304163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03147 43 227 Receptor kinase-like Gene Family AT5G38990 36.019 3.89e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tsu05g03147 Pkinase 1.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03147 - K00924 oeu:111375268 186.037