Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03137 ATGGCACCAAAACCTTTCAACTTTCCCGCCAAACGTACAACCGCCATTTTCCTTCTAACCGCATCCACAGCCGCCGCCGCAGCTACTGCCAACTCCGACAACCTCTCCCCACTCACCACCGACAAAATCAGAGCTCAAATCCATGGAATCGTCCGCACTACTCGTGCCGTCTCTACGgTTGCTTCCACTGTCATCGACTATGAATTCTCGCTTCGCGGCCTGCGAAAACATTCCGATCAGTATCATCAGGCGATTTCACAGGTTCATCTACGTTCTGCGGAGAGGTTTCTCAAATTATGTGAAGATAACAAAGGGTTTTATGTGAAAGCTGGACAATTCATTGCTTCACAAAAAGTGCTTCCGAGAGAGTACTCTTCAACTTTGTCTTCGTTACAGGACCAGGTTTCTCCTCTTCCTTTTAAAGTCATTGAGAAAGTGTTAAAGGATAATCTCGGACCGGATTTTTCTGAGAAGTTTTTGTCCATTGATGAACGACCTATAGGGGCTGCATCTATTGCTCAAGTGCACCATGCAGTACTAAAAAGTGGTCAAGAAGTAGCAATCAAGGTGCAATATCCTTGGATAGAGCAGCAGATGCATTTTGATACAAGAACAATGTATTTCCTATCAAAAACTATTGCATGGCTATACCCTCAATATAGGTTTGAGTGGCTACCATTAGCGTTTGCCAAAACTGTGTCTTCAGAACTTGATTTTGTTCAGGAGGCAAGGAATTCTGAGAGAGCAGCCAAAAATTTCAGAAACAACAAAATGGTCAGAATTCCTGATGTATTCTGGGAGTTGACAACTAGGCAAGTCCTAACAATGCAATTTTATACAGGACACAAGATTGATGACTTGGATTTTCTGAATGAGATTGGAGTTGATCCAGAAAAGGTAGCAAAATCACTGGTTGAGCTGTTTGCTGAAATGATATTTGTGCATGGTTACATACATGGTGATCCACATCCTGGTAATGTACTAGTTTCTCCTGAAGGTCATAATGGTTTCTCTTTGGTTCTTCTAGATCATGCAGTCTACAGGGAATTGGATGAAGAATTTAGGAAAGACTTTTGTCAGTTATGGGAGGCTTTGATTCTCAAGGACTCGAAGAAAACAATGTGGCTTGGTGAGCGATTTGGTGCTGGGAAGTATTCTCGATACTTACCCATCATTTTCACCGGAACAACTATTGAAAGCAAATATTCTTCTGGAATGTCGATCAAGGAAAAATCGACTAtgaaacatgaattgaaatcTCTGTTGTTTGAGGACTTGTTTTCATTCATGGAGTCTATGCCGCCAGATTTTATTGCTATATTGCATGTAGATGCACTCCTGAGGTCTGTCATTAGAAAGATGGATGTCTCACGGCTCATCAGATTGCTAACTTACACCAAATATGCGGTATATGGCCGTCTCTGTCCAAAATTGGACGGTGAACTGTGTAAAATGCCAGGAACAAATGTTTATTTTGCTGTGACAGCTGTTTTCTTAAGTTTCATATCAACATTAAGATATTTTCACATCCTAATCAAGGTCCTTATTGGGGCCATATTTGATAGTACCCCTTGGCGGCAGAAAGTGAAGAATTTGCAAAATTACTTGAATTGCAAGATTGGTAGTAGTGACTTCTGTGGCCTTCTGGCAGACTGGAAGCCACCGTACACGATGGTTATATCGGCAACGGCAACCCATATGGACGCTTCTATCCATTCAACATTCGCCTCTCGCTATGTCCGCACATCCCTTCCCAGGTTTAAGATGGGGGAGAATTCGATCCCGAAGGAAGCCGCGTATCAGATCATAAATGACGAGCTGATGCTGGATGGTAACCCTAGGCTGAATCTTGCATCATTCGTGACCACGTGGATGGAGCCCGAATGCGACAAACTCATCATGGATTCAATTAACAAAAACTATGTCGACATGGATGAGTACCCTGTCACCACCGAGCTCCAGAACCGGTGTGTTAACATGATAGCTCATCTCTTCAATGCACCACTTGAAGAGTCAGAACCTGCAGTTGGTGTTGGCACTGTTGGCTCATCAGAGGCCATAATGTTAGCTGGATTAGCATTCAAGAGGAAGTGGCAAAACAGAAGGAGAAGTGAAGGGAAATCTTGTGAAAATCCAAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTTGAGGTGGAACTGAAAGAGGTGAAGCTGAGTGATGGATACTATGTATTGGACCCTGAAAAAGCTGCTGAAATGGTAGATGAGAACACCATTTGTGTTGCTGCTATTCTTGGTTCCACATTAAACGGAGAATTCGAAGATGTCAAGCGCTTGAACGATCTCCTAATAGCAAAAAATGCTGAAACTGGTTGGGAAACTCCAATTCATGTGGATGCAGCTAGTGGTGGATTCATTGCACCATTTCTTTATCCAGAACTAGAGTGGGACTTTCGTTTACCACTTGTGAAGAGTATTAATGTTAGTGGACACAAATATGGTTTAGTCTATGCTGGTATTGGTTGGGTCATCTGGAGAAGCAAGGACGATCTTCCTGATGAACTCATCTTTCACATTAACTACCTTGGAGCTGACCAACCTACCTTCACTCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTAATTCGTTTGGGTTATGAGGGATATAGAAATGTGATGGAAAACTGCAGAGACAACATGATGGTACTTAAGGCGGGACTGGAGAAAACGGGTCGGTTTGACATTGTATCCAAAGACGAAGGTGTACCACTAGTGGCCTTCACTTTGAAGGACCACAGCAACTTTAACGAATTCCAAATCTCTGATATGCTGAGACGCTATGGTTGGATAGTGCCGGCATACACCATGCCACCTGATGCACAACATGTAACAGTGCTCCGTGTTGTGATCAGGGAGGACTTTTCGCGTACCTTTGCAGAGCGTCTCGTTATTGACATCACCAAGGTGGTCCATGAGCTGGATTTGGTTCCTGCAAGGGTAGTCAGTACCAACACCGTAGCAGTTTCTGGAGAAGAAGACGGAGAAGATGGTGACAAAGTAATAATTTCTAAGAGTGTTCTGGAGACTCAAAGGAAAATCACTACAGCTTGGAGGAAATTTGTCATGGACAGGAAGAAGACGAACGGTGTTTGTTAA 3180 0.4302 MAPKPFNFPAKRTTAIFLLTASTAAAAATANSDNLSPLTTDKIRAQIHGIVRTTRAVSTVASTVIDYEFSLRGLRKHSDQYHQAISQVHLRSAERFLKLCEDNKGFYVKAGQFIASQKVLPREYSSTLSSLQDQVSPLPFKVIEKVLKDNLGPDFSEKFLSIDERPIGAASIAQVHHAVLKSGQEVAIKVQYPWIEQQMHFDTRTMYFLSKTIAWLYPQYRFEWLPLAFAKTVSSELDFVQEARNSERAAKNFRNNKMVRIPDVFWELTTRQVLTMQFYTGHKIDDLDFLNEIGVDPEKVAKSLVELFAEMIFVHGYIHGDPHPGNVLVSPEGHNGFSLVLLDHAVYRELDEEFRKDFCQLWEALILKDSKKTMWLGERFGAGKYSRYLPIIFTGTTIESKYSSGMSIKEKSTMKHELKSLLFEDLFSFMESMPPDFIAILHVDALLRSVIRKMDVSRLIRLLTYTKYAVYGRLCPKLDGELCKMPGTNVYFAVTAVFLSFISTLRYFHILIKVLIGAIFDSTPWRQKVKNLQNYLNCKIGSSDFCGLLADWKPPYTMVISATATHMDASIHSTFASRYVRTSLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRRSEGKSCENPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYYVLDPEKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIAKNAETGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKDDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMMVLKAGLEKTGRFDIVSKDEGVPLVAFTLKDHSNFNEFQISDMLRRYGWIVPAYTMPPDAQHVTVLRVVIREDFSRTFAERLVIDITKVVHELDLVPARVVSTNTVAVSGEEDGEDGDKVIISKSVLETQRKITTAWRKFVMDRKKTNGVC 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03137 1059 CDD ADCK1-like 130 372 IPR045307 -
Tsu05g03137 1059 Pfam ABC1 atypical kinase-like domain 130 373 IPR004147 -
Tsu05g03137 1059 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 573 1001 IPR010107 GO:0004351|GO:0006536|GO:0030170
Tsu05g03137 1059 PANTHER GLUTAMATE DECARBOXYLASE 558 1059 IPR010107 GO:0004351|GO:0006536|GO:0030170
Tsu05g03137 1059 Gene3D - 558 622 - -
Tsu05g03137 1059 Gene3D Transferase(Phosphotransferase) domain 1 156 353 - -
Tsu05g03137 1059 SUPERFAMILY PLP-dependent transferases 571 1001 IPR015424 -
Tsu05g03137 1059 Gene3D - 918 1005 - -
Tsu05g03137 1059 PANTHER GLUTAMATE DECARBOXYLASE 558 1059 - -
Tsu05g03137 1059 Gene3D - 623 917 IPR015421 GO:0003824
Tsu05g03137 1059 SUPERFAMILY Protein kinase-like (PK-like) 132 368 IPR011009 -
Tsu05g03137 1059 Pfam Pyridoxal-dependent decarboxylase conserved domain 594 938 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03137 Tsu-Chr5 42191995 42207316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03137 558 1059 Calmodulin-binding Proteins AT5G17330 82.669 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03137 K01580 - gmx:100787167 902.123