Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03136 ATGTctaatttttctctctcctttctactcttcttcttcttcatagcTTTTTCAATTTTCAGCTTTTCTATAATCGCTTCCACCGAATTTGACTTCGGAACATTAACTCTCACAAGTCTCAAACTTCTCGGTGATGCCCATTTAAACAATGGAACCGTAACACTAACACGTGACCTCACCGTTCCATTTTCCGGCGCCGGACAAGCTCTTTATTCTCGTCCAATCAAATTCCGGCAACCGGGTACCACCATTCCGGCGAGCTTCACcacttttttctctttctctgttACAAATTTGAACCCTTCTTCCATCGGTGGTGGTCTTGCTTTTGTAATTACCCCCGACGCCGATTCTCTCGGTGACGCCGGTGGTTATCTTGGTCTTGCCGCTGATGGGTTTATTGCTGTTGAATTTGATACTTTAATGGACGTTGAATTTAAAGATATTAATGGGAATCATGTTGGGGTTGATCTTAATAGTGTTGTTTCTAGTAAAGTTGGTGACTTGGATTCAATTGGGGTTGATCTTAAAAGTGGTGATTCAGTTAATGCTTGGATTGAATTTGATGGATCCAATAATGGGTTTAATGTTTGGGTTTCTTATTCTAATCTTAAACCTAAAGATCCAATTTTGTCTATGAATCTTGATATGGGTCAATATTTGAATGATTTTATGTATGTTGGTTTTTCTGGTTCAACTCAAGGGAGTACAGAGATTCATAGAGTTGAATGGTGGAGTTTTAGTTCATCTTTTGGTTCGGGTTCTGGTTATTCTTCCAGTTTACCGCCTCCTCCGGCAGTTAGTTTGATGAATACGTCGACCAATTCAGCAAGGTCACCACCTCCTTCTATGGCTCCTTCAATGAATTCTACAAATGTAGAGAGAAAAGAGAGTAAGAAGAGTTGTCATAATGGGTTGTGTAAGCAAGGTTTAGGAGCTGTTGCTGGTGTTGTTACTGCTGGTGCTTTTGTTTTAGCACTTTTTGCAGGGTCTATGATATGGTTGTATTCGAAGAAAGTGAAGCGTGTGAGTAGATTTGATTCTCTTGGATCAGAGATAATTAAAATGCCTAAGCAGTTTAGTTACAAGGAGCTTAAAGCTGCTACCAAATGTTTCAATGGTAATAGGATTATTGGTCATGGTGCATTTGGGACTGTGTATAAGGGAATTTTGACTGAGAATGGTGACATTGTTGCTGTGAAGAGGTGTAGTCATAGTAGTCAAGGTAAGAATGAGTTTTTATCTGAGTTGTCTATAATTGGTAGCCTTAGACATCGAAATCTTGTTAGACTTCAAGGATGGTGTCATGAGAAAGGTGAGATTTTGTTGGTGTATGATTTGATGCCTAACGGTAGTTTGGATAAGGCTTTGTTTGAGGCTAGAACGCCTCTTCCTTGGTCTCACCGTCGCAAGATTTTGTTGGGTGTGGCATCTGCTTTGGCTTACTTGCATCAAGAGTGTGAAAATCAGGTAATTCATAGAGACATTAAGACCAGTAATATAATGTTAGATGAAGGTTTTAATGCGCGTTTGGGAGATTTTGGATTAGCAAGACAAACTGAGCATGACAAGTCTCCAGATGCCACTGTGGCTGCTGGAACAATGGGATATCTAGCACCTGAGTATCTTCTCACAGGTAAAGCCACCGAGAAAACCGACGTGTTCAGCTATGGTGCTGTGGTTCTTGAGGTGGCAAGTGGGAGGAGACCTATAGAGAGAGATGCTACCGGTGTTGGCAAAGTTGGTGTGAGTAGCAATTTGGTGGAATGGGTTTGGAGTTTGCATCGGGAAGGAAGGTTATTAATGGCAGCAGATCCAAGGCTTGAGGGCGAGTTCGATGAAGGGGAGATGAGAAGGGTACTCTTAGTTGGGCTAGCTTGCTCACAACCTGATCCATTTGCCAGACCAACAATGAGAGGTGTGGTTCAGATGCTAGGGGGTGAAACTGAAGTGCCAATTGTCCCAAGAACGAAGCCTTCTACGGGTCTCAGTACTTCGCACTCTCACCTCTTACTGAGCTTACAAGATAGTGTATCTGACTGTGATGGTATAATCACCATTTCTACCTCCACATCAGAGAACAGCTTCAATGGTGGAGATATAGTCTGA 2109 0.4083 MSNFSLSFLLFFFFIAFSIFSFSIIASTEFDFGTLTLTSLKLLGDAHLNNGTVTLTRDLTVPFSGAGQALYSRPIKFRQPGTTIPASFTTFFSFSVTNLNPSSIGGGLAFVITPDADSLGDAGGYLGLAADGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSKVGDLDSIGVDLKSGDSVNAWIEFDGSNNGFNVWVSYSNLKPKDPILSMNLDMGQYLNDFMYVGFSGSTQGSTEIHRVEWWSFSSSFGSGSGYSSSLPPPPAVSLMNTSTNSARSPPPSMAPSMNSTNVERKESKKSCHNGLCKQGLGAVAGVVTAGAFVLALFAGSMIWLYSKKVKRVSRFDSLGSEIIKMPKQFSYKELKAATKCFNGNRIIGHGAFGTVYKGILTENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIERDATGVGKVGVSSNLVEWVWSLHREGRLLMAADPRLEGEFDEGEMRRVLLVGLACSQPDPFARPTMRGVVQMLGGETEVPIVPRTKPSTGLSTSHSHLLLSLQDSVSDCDGIITISTSTSENSFNGGDIV 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03136 702 Pfam Protein kinase domain 375 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03136 702 ProSiteProfiles Protein kinase domain profile. 372 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03136 702 Gene3D - 25 258 - -
Tsu05g03136 702 SUPERFAMILY Protein kinase-like (PK-like) 354 666 IPR011009 -
Tsu05g03136 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 264 IPR013320 -
Tsu05g03136 702 CDD lectin_legume_LecRK_Arcelin_ConA 44 245 IPR001220 GO:0030246
Tsu05g03136 702 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 25 695 - -
Tsu05g03136 702 Gene3D Transferase(Phosphotransferase) domain 1 448 652 - -
Tsu05g03136 702 CDD STKc_IRAK 378 645 - -
Tsu05g03136 702 PANTHER - 25 695 - -
Tsu05g03136 702 ProSitePatterns Protein kinases ATP-binding region signature. 378 401 IPR017441 GO:0005524
Tsu05g03136 702 Gene3D Phosphorylase Kinase; domain 1 335 447 - -
Tsu05g03136 702 SMART serkin_6 372 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03136 702 MobiDBLite consensus disorder prediction 268 290 - -
Tsu05g03136 702 Pfam Legume lectin domain 28 252 IPR001220 GO:0030246
Tsu05g03136 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03136 Tsu-Chr5 42188659 42191407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03136 9 684 Receptor kinase-like Gene Family AT3G53380 70.247 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu05g03136 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03136 - - gmx:100793157 1054.28