Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03119 ATGGAATACCCACATCGTTGTCTCTTCACTACTTTGGCGGTTCTCGACAAAATTCAGTCTTTCGTTTTTCTCATCGCTAGGATGCGCAACAGGTCCAAGGGGGAGTTTACCAGCCAAGATCACCAGATACTGAGAATCTATAAGAATAATTACAGGGATGGCGTCTGCCTGGCTGCTATGCAGACACATATCGACTGCTCCCAGATCCAGTCGTTCAAATGCAACAACCTAAGGGTTCTGAATCGTGATCCGCGTTGTGGATCAACATCGGATGATGCAACATGCAACAATGGCAGCAGAAAATCGAAAGAAGCGAAAGCATTTCAGTACTGCTCCATTTCTTGCATGGCGAAAGCTGCAAGAAAGTCTTCAATTCCTCCCATCATTTCCATCCAGGCTCGTCCTTCTCAGGAATCACTGGGGGAAATTTCTGAGCCCTCTAAGCGAAAGAGGAAACGAAAAGGAACTCCACATAGAGCTCCTTTGTTCTAA 492 0.4614 MEYPHRCLFTTLAVLDKIQSFVFLIARMRNRSKGEFTSQDHQILRIYKNNYRDGVCLAAMQTHIDCSQIQSFKCNNLRVLNRDPRCGSTSDDATCNNGSRKSKEAKAFQYCSISCMAKAARKSSIPPIISIQARPSQESLGEISEPSKRKRKRKGTPHRAPLF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03119 163 MobiDBLite consensus disorder prediction 128 163 - -
Tsu05g03119 163 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 38 163 - -
Tsu05g03119 163 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 38 163 - -
Tsu05g03119 163 Pfam PLATZ transcription factor 48 115 IPR006734 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tsu05g03119 PLATZ 2.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03119 - - mtr:MTR_5g077740 134.42