Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03113 ATGGATGCACAAGCCAAGAAAAAAGCATTGTTTCGTGCCAAATTGAATGCCCAGAAGAAGGAAAAACGCATAGAATCTCCCCTTGTTAGGTATAATGAATTTGAGCAGCCTGTTTGCCGGGTTTGTGAAGTTGTTCTGAAGTCGGAGTCCCTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTTAAAGCTAATGCAGCTGGGTTAACTAAGCAAAACAACACAAAGCCTGATATTCCCAAGGCTAAACCCGAACAGTCTTCAAGCTCACAGTTCAAAATTCCCCGAAGCCCACAAGAAGTACCTAAACCTCAGTCATCATCAGTTCTTCCGCCAGATTTTTTTGACAACAATGATGCAAAAACGACAAGATCTGAAAAGGACTCTGACTCAGATTTAGGTAGGAACGTGGGGGCTTCTCCTCAAAGTTTGGTGTCAAACTCGAAGGAGAAAGACCATTTTCATGGAAATAATACTACACAGTCTAAGGTTAATCAAGCAACAGTGGAGGCTAAGCAGACATCAGTCAAAACTACAGATGCAGAGATCAAACAAGGAAAAGGAGCTCTGCCTGAAGGCTTTTTTGATAATAAAGAGGCTGATTTGCGGGCACGTGGCATTAAGCTAGTTAAGCCAGATGTCAAAGATGAGTACAAGGAATTTGAGAAGTCTATTCAAGAGGACTTGCGGGAGGTGGATGATCGGTTGGAAGAAGAAGAGATTGATGCTGCAGAAATGATAGAAGAAGCTGAATCTGCTGAACAAAAAAGCTTAAAGGAGAAAGTGGAAATGTTGAAGAGGAAGAGATTGGAACTAAAGGCTTTTAAATCAGCAAAGCTTAGTAAATCTTCTGATGTTGTAACCAAAGAGTCTAGACATGAAGATTCATCCAGTGATGATGAAAGTGGTGAGAATTTTGCCGTGGACTGGAGAGCTCAACACTTGTGA 966 0.4172 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFEQPVCRVCEVVLKSESLWDAHQVSRKHREAISNLKANAAGLTKQNNTKPDIPKAKPEQSSSSQFKIPRSPQEVPKPQSSSVLPPDFFDNNDAKTTRSEKDSDSDLGRNVGASPQSLVSNSKEKDHFHGNNTTQSKVNQATVEAKQTSVKTTDAEIKQGKGALPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKSIQEDLREVDDRLEEEEIDAAEMIEEAESAEQKSLKEKVEMLKRKRLELKAFKSAKLSKSSDVVTKESRHEDSSSDDESGENFAVDWRAQHL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03113 321 MobiDBLite consensus disorder prediction 125 139 - -
Tsu05g03113 321 Pfam Zinc-finger of C2H2 type 39 61 - -
Tsu05g03113 321 Coils Coil 228 274 - -
Tsu05g03113 321 Gene3D Classic Zinc Finger 32 70 - -
Tsu05g03113 321 MobiDBLite consensus disorder prediction 284 313 - -
Tsu05g03113 321 Coils Coil 58 78 - -
Tsu05g03113 321 MobiDBLite consensus disorder prediction 70 190 - -
Tsu05g03113 321 MobiDBLite consensus disorder prediction 71 119 - -
Tsu05g03113 321 PANTHER UNCHARACTERIZED 1 321 IPR040050 GO:0003676|GO:0005681|GO:0008270
Tsu05g03113 321 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Tsu05g03113 321 MobiDBLite consensus disorder prediction 284 321 - -
Tsu05g03113 321 MobiDBLite consensus disorder prediction 164 187 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03113 1 321 C2H2 Transcription Factor Family AT3G02860 53.731 1.82e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03113 K13104 - gmx:100808515 436.032