Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03095 atgaaaatgaaaaatactcCTCTATTTTTTCTCGTAGCATGTTTAATTGTCATTGTTTCCAGTGCCGATCTAGCTTCTGATCGAGAAGTTCTAATAAAACTACGGGCCTCTGTCGGAGGACGGACTCGTTTTTGGAACATGACCGAGACAGACCCGTGTTTATGGAGTGGAGTTACCTGCAATAACAAAAGAGTTACAGCTTTAAGATTACCGGCGATGGGTCTCACCGGTAATCTTCCTTTAGGATTAGGAAATCTTACTGAATTGCAGACACTTTCTCTCCGGTTCAATGCGTTAACCGGAGAAATTCCTTCTGATTTTGGGAATTTGGTTTCGTTAAGAAATCTTTATCTTCATAGTAATTTTTTCTCCGGTGAGGTTCCTGAATTTTTGTTTAGTTTGCAGAAATTGGTACGGTTGAATTTAGGTAAAAACAATTTCAGCGGTGAAGTTTCGGAGAAATTCAATAAGCTAACTCGTTTGGATACACTCTTTTTGGAGCAAAATAGCTTCACTGGTTCAGTTCCTGATCTTAATGTTCCTCCATTACATCAATTCAATGTGTCGTTTAACAATTTGACCGGTTCGATTCCTAAGAGGTTTTCGCGTTTAGATATAAGCGTTTTTTCTGGTAATTCGCTTTGTGGGAATCCTCTTCAAGTAACTTGTCCTGGAAAGAGTAACAAAAAGGGATTATCTGGTGGAGCTATTGCTGGAATTGTGATTGGttgtgtttttggttttttgttgaTTCTGATACTTTTGGTGTTGTGTtgtagaaaaagaagaaaaagtgattCTGATAATGGAGCACGTGCTAAGAGTGAAGTGTCACGTGATGTTGAGAGTGgtggcggtggtggtggtgctgATGGAGGCAATTATTCAGGTTTGGCTTCAGCTTCGACAACAGCTTCGGCTTCTGGTGTATCATTAGAGAAGAGTTTGGTGTTAATTGGAAATGTGACTAGTAAATTTAGTTTAGATGATTTGTTAAGAGCTTCTGCTGAAGTTTTGGGAAAAGGGACATTTGGAACAACTTATAAGGCAACATTGGAGATGGGAATCAATGTGGCTGTGAAGAGATTAAAGGATGTTACAGCAAGTGAAAGAGAATTCAGAGAGAAAATTGAACAAGTTGGGAAATTTGTTCATGAGAATTTGGTCCCACCTAGAGGTTATTATTTTAGCAAAGATGAAAAACTTATTGTCTATGATTATATGCCAATGGGAAGCTTATCTGCACTTTTGCACGCAAATAATGGTGCTGGAAGGACTCCACTGAATTGGGAAACTAGGTCAACCATTGCCCTTGGTGCTGCCCAAGGGATTGCATACCTACACTCACAAGGTCCAACATCTTCTCATGGAAACATCAAGTCATCAAACATCCTTCTCACCAAATCTTACGAGCCTCGTGTCTCTGACTTTGGCCTCGCCTATCTCGCTCTTCCGACCGTTACGCCCAACCGAATTTCTGGCTACCGTGCACCAGAGGTCACTGATGCGCGCAAAGTATCCCAAAAAGCAGACGTCTACAGCTTCGGTATAATGCTTTTGGAGTTACTTACAGGGAAGGCGCCTACTCATTCGTTGAATGAAGAAGGAGTAGACCTACCAAGATGGGTTCAATCCATCATTCAAGACGAGTGGAACACTGAGGTTTTCGACATGGAGCTTCTCAGGTACCAAAAAGTTGAGGACGAAATGGTGAATCTATTGCAGCTTGCTCTTGAATGTACTGCTCAATATCCTGATAAGAGACCTTCAATGGATGTGGTTGCTAGCAAGATCGAGAAAATTTGTCGTTCTAGTTTAGAGAAAGACGGAGATAAGATTGATGATGAATGA 1851 0.3917 MKMKNTPLFFLVACLIVIVSSADLASDREVLIKLRASVGGRTRFWNMTETDPCLWSGVTCNNKRVTALRLPAMGLTGNLPLGLGNLTELQTLSLRFNALTGEIPSDFGNLVSLRNLYLHSNFFSGEVPEFLFSLQKLVRLNLGKNNFSGEVSEKFNKLTRLDTLFLEQNSFTGSVPDLNVPPLHQFNVSFNNLTGSIPKRFSRLDISVFSGNSLCGNPLQVTCPGKSNKKGLSGGAIAGIVIGCVFGFLLILILLVLCCRKRRKSDSDNGARAKSEVSRDVESGGGGGGADGGNYSGLASASTTASASGVSLEKSLVLIGNVTSKFSLDDLLRASAEVLGKGTFGTTYKATLEMGINVAVKRLKDVTASEREFREKIEQVGKFVHENLVPPRGYYFSKDEKLIVYDYMPMGSLSALLHANNGAGRTPLNWETRSTIALGAAQGIAYLHSQGPTSSHGNIKSSNILLTKSYEPRVSDFGLAYLALPTVTPNRISGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSLNEEGVDLPRWVQSIIQDEWNTEVFDMELLRYQKVEDEMVNLLQLALECTAQYPDKRPSMDVVASKIEKICRSSLEKDGDKIDDE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03095 616 Gene3D Phosphorylase Kinase; domain 1 299 407 - -
Tsu05g03095 616 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Tsu05g03095 616 Gene3D Ribonuclease Inhibitor 26 130 IPR032675 -
Tsu05g03095 616 PANTHER INACTIVE RECEPTOR KINASE-RELATED 8 607 - -
Tsu05g03095 616 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Tsu05g03095 616 ProSiteProfiles Protein kinase domain profile. 333 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03095 616 SUPERFAMILY L domain-like 44 208 - -
Tsu05g03095 616 CDD STKc_IRAK 339 601 - -
Tsu05g03095 616 Gene3D Transferase(Phosphotransferase) domain 1 408 615 - -
Tsu05g03095 616 Pfam Protein tyrosine and serine/threonine kinase 337 597 IPR001245 GO:0004672|GO:0006468
Tsu05g03095 616 SUPERFAMILY Protein kinase-like (PK-like) 337 596 IPR011009 -
Tsu05g03095 616 PANTHER OS05G0588300 PROTEIN 8 607 - -
Tsu05g03095 616 Gene3D Ribonuclease Inhibitor 131 231 IPR032675 -
Tsu05g03095 616 MobiDBLite consensus disorder prediction 265 289 - -
Tsu05g03095 616 MobiDBLite consensus disorder prediction 265 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03095 Tsu-Chr5 41678587 41681604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03095 21 601 Receptor kinase-like Gene Family AT1G48480 55.878 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu05g03095 PK_Tyr_Ser-Thr 3.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03095 - - aprc:113846223 858.211