Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03024 atggggAAAAACATTGTTCCAGTGAAATCTGTTGTGTATGCTCTTTCTCCTTTCCAGCAGAAAATCATGAGCGGTTTGTGGAAGGATTTACCTACCAAAATTCATCACAAGGTCTCCGAAAATTGGATCAGTGCTCTTCTTTTGATTACTCCCGTCGTCGGAACCTACTCGTATGCTATGCACTATGTGGAACAGGAGAAGCTGCACCACAGGTACTGA 219 0.4201 MGKNIVPVKSVVYALSPFQQKIMSGLWKDLPTKIHHKVSENWISALLLITPVVGTYSYAMHYVEQEKLHHRY 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03024 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
Tsu05g03024 72 PANTHER CYTOCHROME B-C1 COMPLEX, SUBUNIT 8 1 72 - -
Tsu05g03024 72 Gene3D - 4 72 IPR036642 GO:0005750|GO:0006122
Tsu05g03024 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11 65 IPR036642 GO:0005750|GO:0006122
Tsu05g03024 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03024 1 72 Chloroplast and Mitochondria Gene Families AT5G05370 76.389 3.38e-38 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03024 - - mtr:MTR_5g075690 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03024 05 40661000 40664007 Tsu05g03024 05 40661000 40664007 ECH