Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03023 ATGAAGTATTTTTCAAAGGGTTGTAAGTGTGAAGTTGTTCTCTGCTTTCTGTTCTGCTGTTGTTTTCTAGCGGCTGCTAGTCAGATAACTGACCCTTCTGAAgCTGACACATTGAAAAGAATaagggacaatttgattgatattaatGGAAATTTGAGCAGCTGGAGCGGCAGAGACCCCTGTGGATCCAAGTGGACAGGCGTTATGTGCTCGATAGTTGATGGCTATCTACATGTTCAACGATTGCATCTAAGTAATCTGAGTTTGGCTGGAACTTTGGCACCTGAGATTGGAAACTTATCTCATCTTGAAATATTGGACTTTATGTGGAACAACATAAGTGGAAGTATACCAAAAGAAATTGGCAATATCAAAACTTTGAGACTCTTGCTCTTGAGTGGAAATCAATTAACAGGTCATTTACCAGAAGAGCTTGGATATCTTCCAGTATTGAACAGAATACAAATTGATGAGAACAATATTACAGGACCAATACCTGTATCCTTTGCAAATCTGACAAATGCACAACACTTTCACATGAACAACAATTCACTTAGTGGACAAATTCCTTCACAGCTTTCTGGCTTAAGAAATCTTCTTCACCTTCTTCTTGACAACAACAATTTATCAGGAGACCTCCCAGATGAACTTGCTGAGATGCCAAGCCTAAATATACTTCAACTTGATAATAACAACTTTGGTGGAAATAGCATTCCAGATTCTTATAGCAACATGTCAAAGTTATTGAAATTGAGCCTTAGGAACTGCAACTTGACAGGACCGATTCCTGATTTAAGCAGGATACCGCATCTTGGTTATCTTGATCTCAGTTTCAATCAGTTGAGTGAATCTATTCCTACTAAACTATCGGAAAATATCACAACCATTGATTTATCAAATAATAAGCTTAATGGAACTATTCCTTCTTACTTTTCTGATCTCCCTCGTCTTCAGAAATTGTCAATTTCAAACAATGAACTGAGCGGCGATGTTCCCTCTTCCATTTGGCAGAACACGACTTTAAATGGAACAGAAAAGCTTTTCTTGGACATGCAAAATAACCAACTTACGAGCATATCGGGCAGCATAACAAATCTTCCTCCAAATATCACAATCCTGCTTAAGGGGAATCCTATATGCTCAAATAACAACAATACCTTAGTTCAATTCTGTGGATCTGAAACTGAAACTGATATGAATGGAAACTCCAATATTACTTGTCCTAGTCAACCATGCCCTCCTCCATATGAATACTCTTTGGAGTGTGTCTGTGTATTGCCGTTAATAGTTTATTATCGGTTGAAAAGTCCCGTATTTTCAGATTTCAATACATATGTAGAAGACTTTGAAAGCTTCTTAACAAGTGGTCTTAACATACAAATTAATCAGCTATTCATTAATAGTTTTGTGTGGGAAGAAGGTCGATTGAGAATGAACTTGAAGCTTTTTCCGATTTCTGTTGATAATACAACGCAGCATACTTTCAATCAAAGCGAGGTTGTTCGGTTAAGAGACATGTTCAGAGAATGGGAAATTCATGAGAGTGACTTGTTTGGGCCTTATGAACTTCTTGACTTTGTTCTCCTTGATCCTTACAAAGACATGATTCTCTCCTCTTCAAGTTCAGGAATAAGCAAAGGTGCATTAGTTGGAATTGTCTTAGGTGCAATTGCCAGTTCAGTTACATTATCTCTAATTGTTGCTATTCTTATATTTAGAATACGTTTGAAAAATTACCGTACAATTTCCAGACGGCGTAAAGATAAAACTTCTAAGATCTCAATAAAAATTGATGGTGTAAGATCATTCAATTATGAAGAAATGGCTTTGGCTACGAACAATTTTAGCCAATCGGCTCAAGTTGGACAAGGCGGATATGGGAAGGTTTATAAAGGAAATCTACCTGATGGAACTGTTGTTGCCATTAAACGTGCGCAAGAAGGTTCACTACAAGGTGAGAAGGAGTTTCTTACAGAAATACAACTGTTATCGAGGTTACATCATCGCAACCTTGTGTCTCTGATTGGATattgtgatgaagatggtgaaCAGATGCTGGTTTATGAATATATGCCAAATGGAACACTGAGGGATCACCTTTCTGCTCATTCTAAAGAACCTCTTAGTTTTCCCATGAGATTGAAGATTGCTCTAGGATCAGCTAAAGGTCTTGTGTATCTACACACAGAGGCTGATCCTCCAATATTCCACAGAGATGTCAAAGCTAGCAACATATTATTAGATTCAAAGTTCATAGCAAAAGTTGCTGATTTTGGACTTTCAAGACTAGCTCCAGTTCCAGATATTGAAGGCAATTTGCCTAATCATATATCTACAGTTGTAAAGGGGACCCCGGGTTACCTTGATCCGGAGTACTTTTTAACTCGCAAGTTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAAATTGTGACTGGAAAGCCACCAATCTTCCATGGTGAAAATATTATTAGACAGGTTAAACTGGCATTCGAATCAGGCGGGGTAATTTCGATCATTGATAATCGAATGGGATTTTACACTTCTGAGATAGTGGAAAAGTTTTTGACATTGGGTTTAAAGTGTTGCAAAGATGCACCAGATGAAAGGCCTAAAATGACAGAAGTAGCTAGAGAACTTGAGAACATATTGTCTATGATGCCTGAGTACCATGCCAAAAAGGGAAGTGAATATGATACAAGTGATTCTGGAACCACATTTAGTTCACAACCTTCATCATCTACTATAAAGAATCCTTTTATTTCAGAAGATATTTTGGGTAGCGACCTTGTTAGTGATGTTGTACCTACCATTAGACCAAGATAG 2838 0.3714 MKYFSKGCKCEVVLCFLFCCCFLAAASQITDPSEADTLKRIRDNLIDINGNLSSWSGRDPCGSKWTGVMCSIVDGYLHVQRLHLSNLSLAGTLAPEIGNLSHLEILDFMWNNISGSIPKEIGNIKTLRLLLLSGNQLTGHLPEELGYLPVLNRIQIDENNITGPIPVSFANLTNAQHFHMNNNSLSGQIPSQLSGLRNLLHLLLDNNNLSGDLPDELAEMPSLNILQLDNNNFGGNSIPDSYSNMSKLLKLSLRNCNLTGPIPDLSRIPHLGYLDLSFNQLSESIPTKLSENITTIDLSNNKLNGTIPSYFSDLPRLQKLSISNNELSGDVPSSIWQNTTLNGTEKLFLDMQNNQLTSISGSITNLPPNITILLKGNPICSNNNNTLVQFCGSETETDMNGNSNITCPSQPCPPPYEYSLECVCVLPLIVYYRLKSPVFSDFNTYVEDFESFLTSGLNIQINQLFINSFVWEEGRLRMNLKLFPISVDNTTQHTFNQSEVVRLRDMFREWEIHESDLFGPYELLDFVLLDPYKDMILSSSSSGISKGALVGIVLGAIASSVTLSLIVAILIFRIRLKNYRTISRRRKDKTSKISIKIDGVRSFNYEEMALATNNFSQSAQVGQGGYGKVYKGNLPDGTVVAIKRAQEGSLQGEKEFLTEIQLLSRLHHRNLVSLIGYCDEDGEQMLVYEYMPNGTLRDHLSAHSKEPLSFPMRLKIALGSAKGLVYLHTEADPPIFHRDVKASNILLDSKFIAKVADFGLSRLAPVPDIEGNLPNHISTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEIVTGKPPIFHGENIIRQVKLAFESGGVISIIDNRMGFYTSEIVEKFLTLGLKCCKDAPDERPKMTEVARELENILSMMPEYHAKKGSEYDTSDSGTTFSSQPSSSTIKNPFISEDILGSDLVSDVVPTIRPR 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03023 945 ProSiteProfiles Protein kinase domain profile. 615 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03023 945 Gene3D Ribonuclease Inhibitor 191 287 IPR032675 -
Tsu05g03023 945 MobiDBLite consensus disorder prediction 898 924 - -
Tsu05g03023 945 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 918 - -
Tsu05g03023 945 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Tsu05g03023 945 MobiDBLite consensus disorder prediction 903 924 - -
Tsu05g03023 945 Gene3D Transferase(Phosphotransferase) domain 1 691 908 - -
Tsu05g03023 945 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Tsu05g03023 945 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Tsu05g03023 945 Gene3D Ribonuclease Inhibitor 288 409 IPR032675 -
Tsu05g03023 945 SUPERFAMILY L domain-like 46 411 - -
Tsu05g03023 945 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 13 918 - -
Tsu05g03023 945 CDD STKc_IRAK 621 887 - -
Tsu05g03023 945 Pfam Protein kinase domain 616 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03023 945 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Tsu05g03023 945 SMART LRR_typ_2 196 220 IPR003591 -
Tsu05g03023 945 SMART LRR_typ_2 268 292 IPR003591 -
Tsu05g03023 945 SMART LRR_typ_2 124 148 IPR003591 -
Tsu05g03023 945 SMART LRR_typ_2 314 338 IPR003591 -
Tsu05g03023 945 Gene3D Phosphorylase Kinase; domain 1 585 690 - -
Tsu05g03023 945 SUPERFAMILY Protein kinase-like (PK-like) 600 902 IPR011009 -
Tsu05g03023 945 SMART serkin_6 615 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03023 945 Pfam Leucine rich repeat 292 341 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03023 Tsu-Chr5 40645139 40653490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03023 19 897 Receptor kinase-like Gene Family AT5G01950 56.250 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Tsu05g03023 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03023 - - gmx:100801035 1357.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03023 05 40645139 40653490 Tsu05g03023 05 40645139 40653490 ECH
Tsu03g00734 03 6520090 6531167 Tsu05g03023 05 40645139 40653490 PCT