Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02997 aTGGGAAACAATAAGTTCAAATTTTCAGATATGATACCAAATGCATGGTTTTACAAGCTTAAAGATATGAGCAAATCATCAAGGACAAGAAATGGTTCACAATCTCATCATGTTATGAAGAACAAAGTAATGACTTCACCAACAACATCTCAAAGGTCACAATTTTCAAGGTATTCTTCACATCATTTCTCAAATGAACAAACAAAAGCTTATAATAAGATATTCAACTCACCAATTCATACCAAAGATTTGAATCTTCCATTCAATGATTCACCAAGAAAGTCTTCAAAAAGAAGGGCTAGAAGAAAAACTATTTATAAGCCTTCTCAACCAATATTTGATCAAGTTCAATCACAAGAacatgataatgatgatgatgatgatttgtcttcaattgaaaattcttcttctgAGTCTTATCATAATCAATGTGTTTCTTCTGAATCTGAATTTTGTGATAGTTTTTCTGTTCCTGATTTGCTTAATTGTAGTTGTAGAGTTAGTTCTTCAACTAATGATATAATCATTGACATGAACAATGAATCTTTTCAAGGAAATGCTAAAAACTTAGATAGTTTTGATGCATTTTCACAACATGGTTTAGCTCCAATATTGACAAAGCAAGTGAAGTTTGATGATAAGATCGAATCTCGAAGTTCGACCGAATTATCGGACGAACTAAAATTCGATCATTCTTTTTCAATCAAAGTTATCAAAGAGGAAGAAAATATTAATAGAACTCaaagaaggagaaaaaaaagtcaaataggTAAAAAAGCTTCTCCTAATTCTCAAGGTATTAAGCTTAGAGTGAATTCTCCAAAACTTGTTAACAAAAGAATTCAAGCTTATGGAAGAAAGAGTGTTTCAAGGAATGATGGAGGGTTTGTAGATGGATTTGCTGTTGTTAAGTCTTCAATTGATCCAATAAGTGATTTTAAGGAATCAATGGTGGAAATGATTGTGGAGAATAATATAAGAGGATCAAAGGATTTAGAGGATTTACTTGCTTGTTATCTTTCTCTTAATTCAAGTGACTATCATGATGTTATTGTTAAAGCTTTTGAGCAAATTTGGTATGATATGGCTCAACTTAGAATGTAA 1104 0.288 MGNNKFKFSDMIPNAWFYKLKDMSKSSRTRNGSQSHHVMKNKVMTSPTTSQRSQFSRYSSHHFSNEQTKAYNKIFNSPIHTKDLNLPFNDSPRKSSKRRARRKTIYKPSQPIFDQVQSQEHDNDDDDDLSSIENSSSESYHNQCVSSESEFCDSFSVPDLLNCSCRVSSSTNDIIIDMNNESFQGNAKNLDSFDAFSQHGLAPILTKQVKFDDKIESRSSTELSDELKFDHSFSIKVIKEEENINRTQRRRKKSQIGKKASPNSQGIKLRVNSPKLVNKRIQAYGRKSVSRNDGGFVDGFAVVKSSIDPISDFKESMVEMIVENNIRGSKDLEDLLACYLSLNSSDYHDVIVKAFEQIWYDMAQLRM 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02997 367 Pfam Transcriptional repressor, ovate 306 362 IPR006458 -
Tsu05g02997 367 ProSiteProfiles OVATE domain profile. 302 361 IPR006458 -
Tsu05g02997 367 MobiDBLite consensus disorder prediction 24 62 - -
Tsu05g02997 367 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 366 IPR038933 GO:0045892
Tsu05g02997 367 PANTHER TRANSCRIPTION REPRESSOR OFP3 3 366 - -
Tsu05g02997 367 MobiDBLite consensus disorder prediction 27 62 - -
Tsu05g02997 367 MobiDBLite consensus disorder prediction 82 136 - -
Tsu05g02997 367 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 300 362 IPR006458 -
Tsu05g02997 367 MobiDBLite consensus disorder prediction 244 266 - -
Tsu05g02997 367 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02997 Tsu-Chr5 40319342 40320494 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu05g02997 Ovate 9.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02997 - - cam:101489571 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02997 05 40319342 40320494 Tsu05g02997 05 40319342 40320494 ECH