Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02991 ATGTCGGAGATTGAACAAGTTCCGCCAGCTACGGCGGAAACCACCACGTTATTCGAAAAATACGAGATCGGAAAACTTCTAGGATGTGGCGCGTTTGCGAAAGTATATCACGCGCGGAACATCGAGAATGGACAAAGTGTTGCTGTGAAAGTAATTAACAAGAAGAAAGTTACTGCAACTGGTCTTGCTGGCAACGTGAAACGTGAAATTTCGATTATGAGTCGTCTTCGTCATCCGAATATTGTTAAGCTTCATGAAGTTCTTGCTACGAAAACTAAGATCTATTTTGTTATGGAATTTGCTAAAGGTGGTGAACTTTTTGCGAAGATTGCTAGTAAAGGAAGGTTTAGTGAAGATCTATCTAGGAAGCTTTTTCAACAGTTGATTTCTGCTGTTGGTTATTGTCATTCTCTTGGTGTTTTTCATCGTGATTTGAAACCGGAAAATCTATTACTTGATGATAAGGGGAATTTGAAGGTTTCAGATTTCGGATTAAGTGCGGTTAAAGAGCAAATTCGTGTGGATGGAATGTTGCACACGCTTTGCGGAACGCCTGCTTACGTCGCACCGGAGATTTTGGCGAAGAGAGGTTATGATGGAGCTAAGGTGGATGTTTGGTCGTGTGGTATTATTCTCTTTGTTCTTGTTGCTGGTTATCTTCCATTTAACGATCCAAATTTGATGGTGATGTATAGGAAGATATATAGTGGAGAATTTAAGTGTCCGCGATGGTTTTCACCGGATCTAAGGAGGTTTTTATCGCGGTTGTTGGATACGAAACCTGAGACGAGGATAACCGTTGAGGAGATTATGCAGGATCCTTGGTTTAGAAAAGGGTATAAGGAGGTGAAGTTTCATGAAGAGGGGGTTGGACTTGGGGAGAAGGTTAATGGGGAAGAAGAAAGTAAAACAACGGATTTGAACGCGTTTGatattatatcatttttctcttcagGGTTGGATCTTTCAGGGTTGTTTACAGATGTAGAAGGGGAGAGATTCGTGTTGAGGGAGTCGTCGGAGAAGGTTGTTGAGAAGGTGGAGGCAGCAGCGAAGGCGGAGGGACTAGTGGTAAGAAAGAAGAAGGAATTTGGGGTGGAGATTGAGACCCAAAACGGGGGTTTGGTCATTGGGGTTGAGGTTTACCGGTTATTGGCTGAGGTGGTTGTGGTTGAGGTGAAGAGGTTTGGCGGGGATGAGCTTGCTTTTGATGAAGTGTGGAAGAATAAGTTGAGACCCCACTTGTGTGATGCGACGACGTCGCAACAGGACCAAACTCAGTCTCATGCGACGGCGGTCTGTGCTGAATAA 1311 0.4333 MSEIEQVPPATAETTTLFEKYEIGKLLGCGAFAKVYHARNIENGQSVAVKVINKKKVTATGLAGNVKREISIMSRLRHPNIVKLHEVLATKTKIYFVMEFAKGGELFAKIASKGRFSEDLSRKLFQQLISAVGYCHSLGVFHRDLKPENLLLDDKGNLKVSDFGLSAVKEQIRVDGMLHTLCGTPAYVAPEILAKRGYDGAKVDVWSCGIILFVLVAGYLPFNDPNLMVMYRKIYSGEFKCPRWFSPDLRRFLSRLLDTKPETRITVEEIMQDPWFRKGYKEVKFHEEGVGLGEKVNGEEESKTTDLNAFDIISFFSSGLDLSGLFTDVEGERFVLRESSEKVVEKVEAAAKAEGLVVRKKKEFGVEIETQNGGLVIGVEVYRLLAEVVVVEVKRFGGDELAFDEVWKNKLRPHLCDATTSQQDQTQSHATAVCAE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02991 436 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Tsu05g02991 436 CDD CIPK_C 308 416 - -
Tsu05g02991 436 Pfam NAF domain 306 360 IPR004041 GO:0007165
Tsu05g02991 436 PANTHER - 1 421 - -
Tsu05g02991 436 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
Tsu05g02991 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Tsu05g02991 436 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02991 436 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02991 436 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 421 - -
Tsu05g02991 436 SUPERFAMILY Protein kinase-like (PK-like) 18 285 IPR011009 -
Tsu05g02991 436 Gene3D Kinase associated domain 1, KA1 308 419 - -
Tsu05g02991 436 Gene3D Transferase(Phosphotransferase) domain 1 12 307 - -
Tsu05g02991 436 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02991 Tsu-Chr5 40254673 40257465 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02991 1 421 CBL-interacting serine-threonine protein kinases AT2G30360 63.279 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu05g02991 Pkinase 4.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02991 - K12761 gmx:100815088 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02991 05 40254673 40257465 Tsu05g02991 05 40254673 40257465 ECH
Tsu03g00775 03 7003368 7004923 Tsu05g02991 05 40254673 40257465 PCT