Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02989 ATGGAGAATACATCAAAGATCTTGATGCAAAGATATGAATTAGGAAGATTACTAGGCCAAGGAACTTTTGGAAAAGTTTACTATGGGAGAAGTACAATAACTAACCAAGGTGTAGCTATTAAAATGATTGACAAGGATAAGGTTATAAAAAATGACCAAGCTGATAGCATAAAAAGGGAAATATCAATCATGAGACTCGTAAAACATCCGAATATCATACAGCTTTTTGAGGTCATGGCAACGAAGAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGCGGCGAGCTTTTCAAGAAAGTAGCAAAAGGAAAACTCAAAGAAGATATTGCACACAAATATTTCAAGCAGTTAATTAGTGCAGTTGATTATTGTCACAGTAGAGGTGTATACCATAGAGACATAAAGCCAGAAAACATTCTATTAGATGAGAATGAGAATCTGAAAGTATCAGATTTTGGTTTAAGTGCTTTGGCCGAATCAAAAAGGCAAGACGGTTTGTTACATACAACTTGTGGAACACCTGCTTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGTTATGATGGTTCGAAAGCTGATATTTGGTCTTGTGGAgttgttctttttgttttgcttgCTGGTTATGTACCTTTTAATGACACCAATTTGATGGACATGTATAGAAAGATAAGTAATGCAGATTTTAAGTTTCCTAATTGGTTTCCGAGAAATGTTAGGAAACTATTGAGCAAGATGTTGGATCCAAATCCTGACACTAGGATATGTATTGATAACATTAAACAATGTTCTTGGTTTAAGTATGGACCAAATGGTAGACAGAAAAAACAAGTGGAAAACAATACTATCTCTTCTTTGGCAACAAATTCTGTAGCACCGACACATCAGATTGAAGGCGTGTCGGTATCCAACATTGACGCGACACCTACGCATGTGACAGATCATTTTGATCAAAGGGATGAAACTGAAAAGCAAGAGTCGGTTGTGCCTGTGAGCATAAATGCCTTTGATATTATCTCTCTTTCGACTGGTTTTAATCTATGTGCATTCTTTGAAGACAGCTTTAAGAAAAGGGAAGCGAGGTTTACTTCGAGACAACCTGCATCGGTCATTATTTCGAGGATGGAAGAGATTGCTAAGAGACTGAAgatgaaaataaagaaaagggCTGCTGGTTTATTGAAATTAGAGGGAGTTGATGAAGGTAGGAAAGGTATATTGTGCATTAATGCTGAGATTTTTGAGGTTACTCCATTTTTTCATTTGGTTGAAGTGAAAAAATCAAATGGAGATACATTGGAATATCAGAAAATATTGAATGATGATATTAGGCCTGCTCTTCAAGATATTGTTTGGGTTTGGCAAGGTGAGTTACAAGAACAATCTCAACAGTCA 1395 0.3513 MENTSKILMQRYELGRLLGQGTFGKVYYGRSTITNQGVAIKMIDKDKVIKNDQADSIKREISIMRLVKHPNIIQLFEVMATKSKIYFVIEYAKGGELFKKVAKGKLKEDIAHKYFKQLISAVDYCHSRGVYHRDIKPENILLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVIKRKGYDGSKADIWSCGVVLFVLLAGYVPFNDTNLMDMYRKISNADFKFPNWFPRNVRKLLSKMLDPNPDTRICIDNIKQCSWFKYGPNGRQKKQVENNTISSLATNSVAPTHQIEGVSVSNIDATPTHVTDHFDQRDETEKQESVVPVSINAFDIISLSTGFNLCAFFEDSFKKREARFTSRQPASVIISRMEEIAKRLKMKIKKRAAGLLKLEGVDEGRKGILCINAEIFEVTPFFHLVEVKKSNGDTLEYQKILNDDIRPALQDIVWVWQGELQEQSQQS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02989 465 Gene3D Transferase(Phosphotransferase) domain 1 2 331 - -
Tsu05g02989 465 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 464 - -
Tsu05g02989 465 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02989 465 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02989 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Tsu05g02989 465 Gene3D Kinase associated domain 1, KA1 332 453 - -
Tsu05g02989 465 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02989 465 Pfam NAF domain 330 388 IPR004041 GO:0007165
Tsu05g02989 465 CDD CIPK_C 334 448 - -
Tsu05g02989 465 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Tsu05g02989 465 PANTHER - 2 464 - -
Tsu05g02989 465 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Tsu05g02989 465 ProSiteProfiles NAF domain profile. 328 352 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02989 Tsu-Chr5 40231889 40233283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02989 1 460 CBL-interacting serine-threonine protein kinases AT5G58380 64.859 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu05g02989 Pkinase 1.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02989 - K07198 gmx:100779316 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02989 05 40231889 40233283 Tsu05g02989 05 40231889 40233283 ECH
Tsu05g02989 05 40231889 40233283 Tsu03g00784 03 7136311 7138994 ECH
Tsu04g01522 04 15941741 15945359 Tsu05g02989 05 40231889 40233283 ECH
Tsu06g00758 06 6763209 6764567 Tsu05g02989 05 40231889 40233283 ECH
Tsu03g00784 03 7136311 7138994 Tsu05g02989 05 40231889 40233283 PCT