Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02982 ATGGCACTCTCTTTTTCTTCTAAAGCTTTACTGGACTTTTGCTTTGTGTTGTTCATGTTTTTGCTTATAGGGAGTTCTTCAGCTCAACTTTCTGAAAACTTCTATGCCAAGAAATGTCCAAATCTTTTCAATATTGTGAACTCTGTTGTTCACTCGGCTGTTGCTATCGAACCTCGCATGGGAGCATCTCTTCTTCGCCTCCATTTTCATGACTGCTTTGTCAATGGTTGTGATGGATCGGTACTACTTGATGACACCCCCTACACAAAAGGAGAGAAGACTGCACTCCCCAACCAAAATTCATTGAGAGGTTTTGAAGTCATTGATGCAATAAAGTATAAGGTGGAGTCTTTATGTCCCGGTGTGGTCTCATGTGCTGATATTGTAGCCATTGCTGCTCGTGACTCTGTTGCAAATCTTGGAGGGCCTCTTTGGAATGTTAAACTTGGAAGAAGGGATTCAAAGACAGCCAGCTTTAACGATGCAAGCAGTGGTGTTTTGCCATCACCCTTTTCTCCACTTAGCACCCTTATCAATACTTTTAAAGCTCAAGGACTCTCTACTAAGGACATGGTGGCCTTATCTGGAGCTCACACAATTGGTAAGGCAAGGTGTACTATTTACAAAAATCGTATTTACAATGATGCTAACATTGATAGTTTATTTGCAAAGGCAAGACAAAGAATCTGTCCAAGAACAAATGGTACAATAAAAGACAACAATGTAGCTAATCTAGATTTCAAAACTCCAAACCATTTTGATAACGTGTACTATAAGAATCTCATCAACAAAAAGGGACTCCTTCATTCTGATCAACAACTTTTCAATGGAGGATCAACTGATTCATTGGTTAATGCTTATAGCAATGATCCAAAAGCCTTTGAATGTGATTTTGTTACTGCAATAATTAAGATGGGGAATATTAAGCCTCTTACTGGATCAAACGGGGAGATTAGGAAGCAATGCAGGATAGCCAATTAA 981 0.3925 MALSFSSKALLDFCFVLFMFLLIGSSSAQLSENFYAKKCPNLFNIVNSVVHSAVAIEPRMGASLLRLHFHDCFVNGCDGSVLLDDTPYTKGEKTALPNQNSLRGFEVIDAIKYKVESLCPGVVSCADIVAIAARDSVANLGGPLWNVKLGRRDSKTASFNDASSGVLPSPFSPLSTLINTFKAQGLSTKDMVALSGAHTIGKARCTIYKNRIYNDANIDSLFAKARQRICPRTNGTIKDNNVANLDFKTPNHFDNVYYKNLINKKGLLHSDQQLFNGGSTDSLVNAYSNDPKAFECDFVTAIIKMGNIKPLTGSNGEIRKQCRIAN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02982 326 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 ProSiteProfiles Plant heme peroxidase family profile. 29 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PANTHER PEROXIDASE 72-RELATED 9 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02982 326 Gene3D Peroxidase, domain 2 168 305 - -
Tsu05g02982 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Tsu05g02982 326 PANTHER PEROXIDASE 9 325 - -
Tsu05g02982 326 Gene3D - 33 323 - -
Tsu05g02982 326 CDD secretory_peroxidase 29 323 IPR033905 GO:0004601|GO:0042744
Tsu05g02982 326 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02982 Tsu-Chr5 40135453 40140629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02982 10 326 Peroxidase AT5G58390 63.091 3.05e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02982 K00430 - gmx:100812478 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02982 05 40135453 40140629 Tsu05g02982 05 40135453 40140629 ECH