Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02978 atgccCCCCACCATGACTCTACCAACCCCAACAGCAGTAGAAACGCCAGCAACAAAGCAAAAACGGCAGTATTCTAGTTGGACAATGCGCGACAATTCTTGTATTGGCTTTTTGCTTCTAATCGTGAGCCTTATTTCACTTTCGGTGAAATATTATTCATCACCTGAAGATGACTTGAAGGCAAATTTCCCTCATCTCTCTTTATATAGTTTAatgAGTTACATTGTTTACACTGGAAGCAATTGTAGAAGCGATGAAACATCTGCATTGCTCCACTATAAAAGTCTTCTACAGCAAGTTGCAACAGACAGCAACCAAGAACCAAAGTCTATCCTCCAGTATTACAAGAGGACTTTTAATGGCTTTGTGGCCAAACTTACAAAGGAAGAAGCCAATAAAATGGCCGGTCTCGACGGAGTGGTATCTGTGTTTCCTAACGAAAAGAGGCACCTCCTTACGACAAAGTCGTGGGATTTTATTGGTCTTACACAACATGCAAGAAGACAAGACTATGAAAGTGATATTATCATTGGGGTAATCGATACTGGGATTTGGCCAGAATCTGCCAGCTTCAATGATAAAGGTTTCGGTCCACCGCCTACCAAATGGAAGGGAACTTGCGAAACTTCTAATTTTACATGCAACAACAAAATAATTGGAGCTAGGTACCATAAACCTCCAAATGCTTCCTTGAGCCGAAATGATCTCGAATCTCCAAGAGATATAAGTGGTCATGGAACTCATACATCATCAATTGCAGCCGGGAACCCTGTACGAATGGCAAGCATGCTAGGCCTTGCAAAAGGTACATCGAGAGGTGGTACTCCATCTGCACGCATTGCTGTATATAAAGCTTGTTGGTTTGATGGATGCTATGAAGAAAGTATTCTTGCTGCATTTGATCATGCGATTGCAGATGGAGTTGATATTTTATCAGTTTCAATTGGAGAAGCTTCAAGTTACAATAGTACCTATTTTAAAGATTCAATATCCATTGGATCATTTCATGCAATGGAGCATGGAGTGTTGACAGTGGTTGCAGCAGGGAACCATGGTCCTCATAATACATCTTTAGAAAATTTTCAACCTTGGACAATTGTTGTGGCTGCAAGTACCTTAGATAGGAAGTTTGTTACCAAAGTCAAATTAGGAGACAATACAACTTATGAGGGTATCTCGTTGAACACATTTGACCTTGGTGGGAAACTATACCCTATTATCTATGGCAGAGATGCACCGAATACTACAGCAGGCGTCCCTCGACACATATCCAGGTTTTGCTCAACCAACACTTTAGATGATAAGTTGGTGAAGGGTAAAATTGTTTTGTGTGAAGGAAGTGAAGGAACCATAGAGGCCTTAAGGGTTGGTGCTATTGGTGTCTTGATGAAAAGTGATTCTGTAGGAGACACGGCTATGTCTTATCCCATTCCTGCATGTTTCCTTCAATCGAAGGATGTCACCAATATACATAATTATATGAGCTCTACAAGGAATCCAATGGCAACCATATATAGGTCCAATGAATTAAAAGATACTTTGGCACCTGTGGTTGCCTCTTTCTCATCAAGGGGTCCAAACCATGCTACAAATGAAATTCTCAAGCCGGATTTGACTGCTCCCGGCGTGGACATTTTAGCTAGTTGGTCTAGAGCTGCTCCAATTTCTACTAATATTGGCGAGAATAGAAAATTGGAGTTCAATATTATGTCAGGCACATCAATGGCGTGCCCACATGTGGCGGGTGCAGCGGCGTATGTCAAATCATTTCACCCTACATGGTCACCTGCCGCTATCCGTTCAGCTCTAATGACAACAGCTAAGCAAATGAGTTCGGAAAATAACCCCGATGCAGAATTTGCATATGGAGCCGGTCAAATTGACCCCGATAAGGCAGTAAATCCTGGTTTAATATATGACGCCAATCAAGAAGattatgttaaatttttatgtgGACATGGTTTCGATAGAACGACTCTACAACGTATCACAGGGGATGAACACAATTGCTCTGACACAACAAATTCATCGTCAAGGGATTTAAATTATCCCTCGTTTGCTCTGAATGCCACAGACTCTAAACACCATCTAAATGTAAGCTTTCGTAGGAGCGTTACAAATGTTGGATTGTCAGCCTCTACATATAGAGCTACTGTGAGAGCCTCGGAAGGTCTCAATATTTCAGTGGATCCCAATGTTTTGTCATTCGCTTCATTGGGAGAAACACAGACATATGTCCTCACTATAGATGGAAAAATGGAGAAATCTATTGAGTCGGCATCTTTAGTTTGGGATGATGGAAAGTTTAAAGTGAGGAGcccaattattatattttatgaaGGAGCAGACAATGAAGTAGACAATGAAGTAGCAGAGAAGAGTGCAACGTCCCCAAATTATTATATTCGAGTTGTTATTATTCTTATTGTAGttatttttgttcttaattGTTATATATGA 2460 0.4016 MPPTMTLPTPTAVETPATKQKRQYSSWTMRDNSCIGFLLLIVSLISLSVKYYSSPEDDLKANFPHLSLYSLMSYIVYTGSNCRSDETSALLHYKSLLQQVATDSNQEPKSILQYYKRTFNGFVAKLTKEEANKMAGLDGVVSVFPNEKRHLLTTKSWDFIGLTQHARRQDYESDIIIGVIDTGIWPESASFNDKGFGPPPTKWKGTCETSNFTCNNKIIGARYHKPPNASLSRNDLESPRDISGHGTHTSSIAAGNPVRMASMLGLAKGTSRGGTPSARIAVYKACWFDGCYEESILAAFDHAIADGVDILSVSIGEASSYNSTYFKDSISIGSFHAMEHGVLTVVAAGNHGPHNTSLENFQPWTIVVAASTLDRKFVTKVKLGDNTTYEGISLNTFDLGGKLYPIIYGRDAPNTTAGVPRHISRFCSTNTLDDKLVKGKIVLCEGSEGTIEALRVGAIGVLMKSDSVGDTAMSYPIPACFLQSKDVTNIHNYMSSTRNPMATIYRSNELKDTLAPVVASFSSRGPNHATNEILKPDLTAPGVDILASWSRAAPISTNIGENRKLEFNIMSGTSMACPHVAGAAAYVKSFHPTWSPAAIRSALMTTAKQMSSENNPDAEFAYGAGQIDPDKAVNPGLIYDANQEDYVKFLCGHGFDRTTLQRITGDEHNCSDTTNSSSRDLNYPSFALNATDSKHHLNVSFRRSVTNVGLSASTYRATVRASEGLNISVDPNVLSFASLGETQTYVLTIDGKMEKSIESASLVWDDGKFKVRSPIIIFYEGADNEVDNEVAEKSATSPNYYIRVVIILIVVIFVLNCYI 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02978 819 CDD PA_subtilisin_like 381 504 - -
Tsu05g02978 819 ProSitePatterns Serine proteases, subtilase family, serine active site. 572 582 IPR023828 -
Tsu05g02978 819 MobiDBLite consensus disorder prediction 231 253 - -
Tsu05g02978 819 Gene3D - 374 511 - -
Tsu05g02978 819 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 778 IPR045051 -
Tsu05g02978 819 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 68 151 IPR037045 -
Tsu05g02978 819 ProSiteProfiles Serine proteases, subtilase domain profile. 156 633 - -
Tsu05g02978 819 Gene3D Peptidase S8/S53 domain 174 646 IPR036852 GO:0004252|GO:0006508
Tsu05g02978 819 SUPERFAMILY Subtilisin-like 151 637 IPR036852 GO:0004252|GO:0006508
Tsu05g02978 819 MobiDBLite consensus disorder prediction 229 253 - -
Tsu05g02978 819 CDD Peptidases_S8_3 150 607 IPR034197 -
Tsu05g02978 819 PANTHER PUTATIVE-RELATED 61 778 - -
Tsu05g02978 819 Pfam Subtilase family 173 625 IPR000209 GO:0006508|GO:0008236
Tsu05g02978 819 Pfam Fibronectin type-III domain 680 777 IPR041469 -
Tsu05g02978 819 PRINTS Subtilisin serine protease family (S8) signature 241 254 IPR015500 -
Tsu05g02978 819 PRINTS Subtilisin serine protease family (S8) signature 172 191 IPR015500 -
Tsu05g02978 819 PRINTS Subtilisin serine protease family (S8) signature 571 587 IPR015500 -
Tsu05g02978 819 Pfam Peptidase inhibitor I9 73 151 IPR010259 -
Tsu05g02978 819 Gene3D - 650 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02978 Tsu-Chr5 40084029 40088875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02978 74 778 Subtilisin-like Serine Gene Family AT5G59100 47.280 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02978 - - cam:101506276 1016.53