Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02972 ATGACACTCATACTCATCAAAATTCGGAGATGGCTGATGTATACAAAGGTATGGAGATTTGTTGGCTTTGCTTCAGCTGTTGTTGGACTTGTCTGTTATGCTCTAAGCTCTTCCTTCAACCATCTATTTGGAAACTGGACTTTGTTGAAGATAATTCTTTATACTGTTTTCAGTTTCATCATTTGCCTTTTGATTTTGTATACAAATATATGGAACCGCTCGAGAAGTCATCGGTTCAAAGCTCATACAGCGTTTTTGGTATTGACAATCACCTCTGTCTATTCCTTTTACTTCGATAAAGTGATGAATAGAAAACCAGATGTATATAGTTTAATTTCATGTGCTGCCTTTGCTATCATGTCACTGAGTTTGTCGCGGCAAACTCAGTGCGGATTCGAAGTGGATCTTCTTTACTTTTTTCTTGGATGTCTAATTGTGTTACTCATGAAGATTAAATTGCAGTTATTCATTCTTGGAGCAGGTTTGAGTTATTCCCTTATCATTCTTcgttctttcttttcttctacaCAAgatattggatactctgaagtCAAACATGAAAATTCAGTAGTTATTGAAGTCAATTCGCTACAACTAGTAGCCAGTACTGATATTGCTAGTACAATGAAACAACTAAGGTGTTATCTTAACACTCTCCAGCAGAAAAATTTGAATCTTGTTGATATACTTTTGAAGCATGTGAATGAATATGGTGACTCTGAATTGATGTTGTTTGGCCCCAACTTCATGATCAGTGAGCTGCCGCCTGAATTGATTAACTACCTTCATGAAACCGCGAAGTTGATGGTTCGCGCTGGATTTGAGGAAGAGTTTTCTAAGGTATACATCAATTGTAGAAGGGAGTGTTTGGAGGAGTGTTTAATAAATAGATTATTTAGCTTGCAGAAGATTAACCTCAAGAATGAACATCAAAGGGTGAGATATGTAGATACTGTGATTAAAAGGTGGATCACAGCATCCGAAATTGCTCTTAAGATTCTATTTCCCTTCGAACAACGACTCTGTGATCATGTCTTTTCAGGTTTCACCTCCTCCGCTACTCGTTGTTTCACCGAGGTTTTCCACGGAACAacatttcagcttctgaatttCGCTAATGAAGTTGTTCATGGAAGCCCTTCAATTTGGCGTTTATTCAAAATGCTCGCAATCTTTGAGACATTGCATTATCTGATACCGAAATTCCAATTATGTCTTGATTCGTCGATGAACGAAACAGCAGTTACAGTCCAAAACAGATTAGGCATAGCAATCAGTGACCTTTTCGCAAAACTGAACTATCTTATTTTTCGTGTCCCGGCAGCTAAGAAAGCTGCTCCGTCTGATGGCCGAGATCATCCAATGACGGTCCAGATAATTAGTTACCTCGCTTCTGCTTGTAGGTCACGTCATACGCTAGAACAAATTTTGCAGGAATATCCCAAGGTGAATAATGGAGTAGTAGTGAAAGTTTCTTTTATAGCACACATGCAGTGGATATTGGATATACTAGAGAAAAGATTGAAAGCCAAGTCTAAAGACTACAAAGACCCTGCTTTGGGCTATCTTTTCATGATGAATAATAGGAGTCACATAGAAGCTATAATTAAAAGTTGGGATTTGGAAACTGTTTTAGGCGATGATTGGTTCCGAAAAAATCAAGTGAAATTTCAACAGGAACTTGAGCTTTATCAAAGAAAGACATGGAATAAGGTGTTGGAGTTTTTGAAGTTGGACAACAATGACTATGTGGCACCTAATGATAATGTTACAGCAGAGTTATTGAAAGAGAAGCTAAAATTGTTCAACAAGTATTTTGATGAGATGTATAGAATTCAGTCTACTTGGTCTGTTTATGACAAGAAGCTGAgagaagaaataataatatcagTGGGAAATACTTTGTTGCCTGTATATGGAATCTTCATTGGGAAGTTTCGGGACTGTTTTGGTGTTCATGCTAATGAATATATTGAATATGGAATGTTTGAAATTCAAGATCGACTCAACAATTTGTTTCTGCAAAAGAGATAG 2034 0.3589 MTLILIKIRRWLMYTKVWRFVGFASAVVGLVCYALSSSFNHLFGNWTLLKIILYTVFSFIICLLILYTNIWNRSRSHRFKAHTAFLVLTITSVYSFYFDKVMNRKPDVYSLISCAAFAIMSLSLSRQTQCGFEVDLLYFFLGCLIVLLMKIKLQLFILGAGLSYSLIILRSFFSSTQDIGYSEVKHENSVVIEVNSLQLVASTDIASTMKQLRCYLNTLQQKNLNLVDILLKHVNEYGDSELMLFGPNFMISELPPELINYLHETAKLMVRAGFEEEFSKVYINCRRECLEECLINRLFSLQKINLKNEHQRVRYVDTVIKRWITASEIALKILFPFEQRLCDHVFSGFTSSATRCFTEVFHGTTFQLLNFANEVVHGSPSIWRLFKMLAIFETLHYLIPKFQLCLDSSMNETAVTVQNRLGIAISDLFAKLNYLIFRVPAAKKAAPSDGRDHPMTVQIISYLASACRSRHTLEQILQEYPKVNNGVVVKVSFIAHMQWILDILEKRLKAKSKDYKDPALGYLFMMNNRSHIEAIIKSWDLETVLGDDWFRKNQVKFQQELELYQRKTWNKVLEFLKLDNNDYVAPNDNVTAELLKEKLKLFNKYFDEMYRIQSTWSVYDKKLREEIIISVGNTLLPVYGIFIGKFRDCFGVHANEYIEYGMFEIQDRLNNLFLQKR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02972 677 Pfam Exo70 exocyst complex subunit 321 670 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02972 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 674 IPR004140 GO:0000145|GO:0006887
Tsu05g02972 677 Gene3D Exocyst complex component Exo70 182 677 - -
Tsu05g02972 677 SUPERFAMILY Cullin repeat-like 209 673 IPR016159 -
Tsu05g02972 677 PANTHER PROTEIN, PUTATIVE-RELATED 9 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02972 Tsu-Chr5 40025817 40028200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02972 248 673 EXO70 exocyst subunit family AT5G58430 46.911 7.98e-110 343