Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02967 ATGGAATCCCAAAATGGAGAGTATGTTGCttcttccaatttgctcaaagCTCAAAGTCACATATGGAATCATATTTTAAACTTCATAAATTCCATGTCACTTAAATGTGTAGTTGATTTAGGTATACCTGATATCATACACAATTATGGTAAACCTATGTCACTCTCAATACTAATTTCTTCACTGCCAATCCATCCTTCAAAAACTTGTTTCATCCATCGTTTGATGCGAATTATCACTCATTCAGGCTTCTTCTCTCAACAAAATGTTACAAAGAATGAGCTAGAAATTGAGTATATGTTAACTGATGCATCAATATTACTACTTAAGGACAATCCAATGAGTGTGACACCGTTCGTGCAAGCAATGCTCGATCCAGTTTTAACAAATCCATGGCATCAGTTATCTACTTGGTTTAAGAGTGATGATCCTACAACATTTAAAACTGCACATGGGATGTCGATATGGGATTATACGGCGAATAAGCCCAACTTTAACAACTTATTCAATGATGCAATGGCGAGTGATGCTCGATTGGTCACTAGTGTGGTAATTGAAAAATGCAAGGGAGTGTTCGATGGTTTGGAATTATTGGTTGATGTTGGAGGAGGCACAGGAACCATGGCAATGACACTTGCTAAATCGTTCCCAAAAATGGAGTGCATTGTATTTGATCTCCCACATGTTGTTGATGGCTTTCATGGAAGTGAAAATCTAAAATATGTTGGTGGAGATATGTTTAAAGAAATTCCTCCAGCAGATGCCATTTTGTTGAAGTGGATATTACATGATTGGAATGATGAAGAATGTCTaaagatattaaaaaattgtaaggATGCAATAGCAAAGAAATGTAAAAAAGGGAAGGTGATTATCATAGATATGGTGTTGGAGAAAGAGAAAGGAAATGGTGAATCAGTTGAAACACAACTTTTCTTTGATATGCTCATGATGGTGTTAGCCTCTGGAAAAGAAAGAACCAAGAAAGAATGGATTAAGTTGATTTCTTCGGCTGGTTTTAGTGACTATAAGATAACTCCAATTTTAGGACTAAGATCTCTCATTGAGATTTATCCTTAA 1080 0.3472 MESQNGEYVASSNLLKAQSHIWNHILNFINSMSLKCVVDLGIPDIIHNYGKPMSLSILISSLPIHPSKTCFIHRLMRIITHSGFFSQQNVTKNELEIEYMLTDASILLLKDNPMSVTPFVQAMLDPVLTNPWHQLSTWFKSDDPTTFKTAHGMSIWDYTANKPNFNNLFNDAMASDARLVTSVVIEKCKGVFDGLELLVDVGGGTGTMAMTLAKSFPKMECIVFDLPHVVDGFHGSENLKYVGGDMFKEIPPADAILLKWILHDWNDEECLKILKNCKDAIAKKCKKGKVIIIDMVLEKEKGNGESVETQLFFDMLMMVLASGKERTKKEWIKLISSAGFSDYKITPILGLRSLIEIYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02967 359 CDD AdoMet_MTases 198 293 - -
Tsu05g02967 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 359 IPR016461 GO:0008168
Tsu05g02967 359 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Tsu05g02967 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 357 IPR029063 -
Tsu05g02967 359 PANTHER O-METHYLTRANSFERASE 9 359 - -
Tsu05g02967 359 Gene3D - 4 108 IPR036388 -
Tsu05g02967 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Tsu05g02967 359 PANTHER O-METHYLTRANSFERASE 9 359 IPR016461 GO:0008168
Tsu05g02967 359 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Tsu05g02967 359 Pfam O-methyltransferase domain 132 341 IPR001077 GO:0008171
Tsu05g02967 359 Gene3D Vaccinia Virus protein VP39 109 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02967 Tsu-Chr5 39960496 39986045 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02967 32 345 Monolignol Biosynthesis Gene Families AT5G54160 33.229 1.38e-54 181