Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02964 ATGGAATTTCAAAATGGAGAGAATGTTGCTCAtgcttccaatttgctcaaagCTCAAAGCCACATATGGAATCATATGTACAGCTTCATAAATTCCATGTCACTTAAATGTGTAGTTGAGTTAGGCATACCAGATATCTTACACAATTATGGCAAACCTATGTCACTCTCAAAACTTATTACTTCATTGCCAATCCACCCTTCAAAAACTTGTTTCATCTATCGCTTGATGCGAATCATGACTCGTTCAGGCTTCTTCTCTCAACAAAATGTTACAGAGAATGAGCTAGAAGTTGAATATATGTTAACTGATGCATCTATGTTACTACTTAAGGACAATCCAATGAGTACGACACCATATGTGTGCGCGATGCTTAATCCAATTATGATGAATCCGTGGCATCAATTATCTACTTggttaaaaaatgatgattcaACAGCATTTGAAACGACACACAAGATGTTGTTATGGGATTACGCTGCGCGCGACTCCAAATTTAACAACTTATTTAATAAGTCAATGGCATGTGATGTTGAGTTAGTTTCTGATTCATTGATTGAGAAGTGCAGGGAAGTGTTCAATGGATTGGAGTCATTGGTTGATGTTGGAGGAGGCTTAGGGGCCATGGCAAAGACTCTTGCCAAATCATTTTCACAAACAGAGTTCACTGTGTTTGATCTTCCACATGTTGTTGCTGGTTTGCAAGGAAgtgaaaaagtaaaatatgttGGTGGTGACATGTTTAAAGAGATTCCTCCTACTAATGCCATTTTGTTGAAGTGGATATTGCATAACTGGAATGACGAagaatgtgtgaagattttgaagaattGTAAGGATGCAATAGCAAAGAAAGGTAAAGAAGGGAAGGTAATTATCATAGAGATGGTGTTGGACACCGAGAACAAAGACAATAATGAATCAATTGAAACACAATTCTTCTATGATATGTTAATGATGGTAGTACTCACaggaaaagagagaaacaaGAAAGAATGGATTAAGTTAATTTCCTTGGCAGGTTTTAGTGACTACAAAATAACTCCAATTTCAGGCTTAAGGTCTGTGATTGAAATCTAtccataa 1086 0.3361 MEFQNGENVAHASNLLKAQSHIWNHMYSFINSMSLKCVVELGIPDILHNYGKPMSLSKLITSLPIHPSKTCFIYRLMRIMTRSGFFSQQNVTENELEVEYMLTDASMLLLKDNPMSTTPYVCAMLNPIMMNPWHQLSTWLKNDDSTAFETTHKMLLWDYAARDSKFNNLFNKSMACDVELVSDSLIEKCREVFNGLESLVDVGGGLGAMAKTLAKSFSQTEFTVFDLPHVVAGLQGSEKVKYVGGDMFKEIPPTNAILLKWILHNWNDEECVKILKNCKDAIAKKGKEGKVIIIEMVLDTENKDNNESIETQFFYDMLMMVVLTGKERNKKEWIKLISLAGFSDYKITPISGLRSVIEIYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02964 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 359 IPR029063 -
Tsu05g02964 361 PANTHER O-METHYLTRANSFERASE 10 361 IPR016461 GO:0008168
Tsu05g02964 361 Gene3D Vaccinia Virus protein VP39 110 361 IPR029063 -
Tsu05g02964 361 Gene3D - 4 109 IPR036388 -
Tsu05g02964 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Tsu05g02964 361 PANTHER O-METHYLTRANSFERASE 10 361 - -
Tsu05g02964 361 SUPERFAMILY "Winged helix" DNA-binding domain 13 114 IPR036390 -
Tsu05g02964 361 Pfam Dimerisation domain 33 80 IPR012967 GO:0046983
Tsu05g02964 361 Pfam O-methyltransferase domain 133 343 IPR001077 GO:0008171
Tsu05g02964 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02964 Tsu-Chr5 39932195 39933376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02964 33 347 Monolignol Biosynthesis Gene Families AT5G54160 31.875 1.38e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02964 - K16040 gmx:100781008 511.531