Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02957 ATGGCTGAAACTAGAGTAAATGCAACCATTACCGATGTTACAAATAATGGAACTGTATGGATATGTGAACACATGTATACGTATCAAAGGTCAAAAGGAATTTTCTTTAAGGATAATCCATTTAGTTTCACATTGCCAGTGCTCTTTCTACAAACAACCTTAGTTTCTGTCTCTACCACAGTTTTACAACTCATACTTGAACCAATTGGGATGAGTAGTTTCGTTCCACAACTTCTgGCAGGCTTGGTACTAGGACCATCAGTTATTGGACAAAATGCGTTCATAAAAAAATGGCTATTCCCACCAAAAACATTCTACATAAGTGAGACAATTGCATTTTTTGGGAGCATGATGTATATGTTCTTAATTGGAGTAAAAATTGATATAAGTGGTGTTACAAGAACAGGGAAAAAAGCTTGGGCAATTggaatattttcatttattatacCACTAATTATGAGCTTTTTATTAGCAATATTTCTAAGAAAAACATTATTAACCCCTGACGAAAGTCTCTACAAGTCTATTTTTAGCATTGTATTTATCTTTTCAACTGGTTCATTTCACGTCACCGCAATTCTCTTAGcggatttaaaattattaagcTCAGAAATGGGCCGATTAGCAATTTCTTCATCTATGGTGAGTGGATTCATTTCGATATTGTGGGTTGCCTTTTTGGCTGCACTGAAACAATCAGAAACAAAGGACGACAACGGTATTTTAAATTGGACGATAATGTCTTTGATCGTTATGATTGTTGTCATCATATATGTTCTACGGCCGATAATGTTATGGATGATACGAAAAACACCAGAAGGGAAACCAATCAAAGAATCGTACATAATTTCGGTGTTTTTAATGGTATTGGGTTGCGCGTTATTTAGCGAGTATATAGGACAACATTTTATGGCTGGGCCTATTATTTTTGGTATGGCTGTTCCTGATGGGCCTCCATTAGGGTCTGCATTGACTGAAAGATTGGATACATTGGTGTCAACTGTTTTTTTACCATTGTATTTTCTTTATAGTGGTATTAGATTTGATCTTTATATAATTGATGCTCAAAGCTTTACAATTGTGCAAGTTCTTGGTATAGTTACAAGCATTGGGAAGATTATAGGAACTTTGTTGCCTTCAATTTATTGGAAGATACCATTTACTGATGTTCTATCTTTAGCACTACTTATGAGTACTCAAGGCATCACACAATTGCTTTATTTGCAGTCTTCTCTACATCTTCACATTATAGATGAACAATCATATGGTAATGCATTGATGGCTCTACTATGGTTAACAGGAGCTACAACACCCATTATAAAATTCCTATATGATCCATCTAAGAGTTACATGTCCTTAAATAGAAGAAGAACCATTGAGCAATCAACTTCAGATATTGAATTACGTATCATGGCATGTATACATACTCAAGATAACACATCATCCATAATCAATCTTCTTGAAATGTCAAACCCTTCATTGGAAAATCCAATTTGTTTCTATGTTTTACATCTACTTCAATTAAAAGGAAGATCTGCACCTCTTTTTATAGATCATCAACCATCAAGCAACAAGTTGAATGCGCCGCATTCGACTCATtctcaaaatataataaacgCCTTTAGATCGTACGAACAACTAAAATCGAACAATGTGGTTGCAAAAGTCTTCACATCAATCTCGCCTTATGAGACGATGCACGATGAGATATGTATGCAAGTTGATGAGAAGAgagtttgtttgttgattgtgCCTTTTCATAGACAATGGATGCCAACCGGGGTTACCGAATCGGCTCAGCCAATTCGAGCCTTAAATCGTCATCTTCTCAGAACGGCACCTTGTTCAGTTGGAATTCTAATCGAACACGGCACTTTGTGTAGGAACAACCCTTTAACTTCTGCCTTGTTTTATAGTGTTGGAATAGTTTTTATAGAAGGAGCCGACGATCGGGAAGCGTTAGCTTATGCGATGCGAATGGCTAATCATCCGAACGTCAGCATAACCCTAATTCGAATAATGGAACCTCGAAAGAAAAATAGGAACTTAATGCATAGAGATCCAGACGGCGATTTGATTCATAGGTTTAAAGTGGATTGTATACAAATTAAACGACACGATTATCGAGAAGAAACCGTAAAAGATACCGTTCAAATGATAAATGTAATAAGGTCACTTGATGgttgttttgatttggttttggttgGTAGAAGACATGCAACTGAATCAAATTTGTTTAGTGGATTAATAGAATGGAATGAGTTTCCAGAACTTGGTCCTATTGGAGACATGTTAGTAGCGTCTGATTCTACTTTTGATGGTTCAGTTTTGGtgattcaacaacaaaaaagatcAGGGATTGGTTATCATGATTTGAGTTTAGATTCTGGTATTAATACAATGCAGGAATCACTAACCATTGTGGAAGTACCTCGTATATATTAG 2445 0.344 MAETRVNATITDVTNNGTVWICEHMYTYQRSKGIFFKDNPFSFTLPVLFLQTTLVSVSTTVLQLILEPIGMSSFVPQLLAGLVLGPSVIGQNAFIKKWLFPPKTFYISETIAFFGSMMYMFLIGVKIDISGVTRTGKKAWAIGIFSFIIPLIMSFLLAIFLRKTLLTPDESLYKSIFSIVFIFSTGSFHVTAILLADLKLLSSEMGRLAISSSMVSGFISILWVAFLAALKQSETKDDNGILNWTIMSLIVMIVVIIYVLRPIMLWMIRKTPEGKPIKESYIISVFLMVLGCALFSEYIGQHFMAGPIIFGMAVPDGPPLGSALTERLDTLVSTVFLPLYFLYSGIRFDLYIIDAQSFTIVQVLGIVTSIGKIIGTLLPSIYWKIPFTDVLSLALLMSTQGITQLLYLQSSLHLHIIDEQSYGNALMALLWLTGATTPIIKFLYDPSKSYMSLNRRRTIEQSTSDIELRIMACIHTQDNTSSIINLLEMSNPSLENPICFYVLHLLQLKGRSAPLFIDHQPSSNKLNAPHSTHSQNIINAFRSYEQLKSNNVVAKVFTSISPYETMHDEICMQVDEKRVCLLIVPFHRQWMPTGVTESAQPIRALNRHLLRTAPCSVGILIEHGTLCRNNPLTSALFYSVGIVFIEGADDREALAYAMRMANHPNVSITLIRIMEPRKKNRNLMHRDPDGDLIHRFKVDCIQIKRHDYREETVKDTVQMINVIRSLDGCFDLVLVGRRHATESNLFSGLIEWNEFPELGPIGDMLVASDSTFDGSVLVIQQQKRSGIGYHDLSLDSGINTMQESLTIVEVPRIY 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02957 814 Pfam Sodium/hydrogen exchanger family 54 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu05g02957 814 PANTHER CATION/H+ EXCHANGER 2 16 795 - -
Tsu05g02957 814 Gene3D - 47 450 IPR038770 -
Tsu05g02957 814 PANTHER CATION/H + ANTIPORTER 16 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02957 Tsu-Chr5 39844450 39847991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02957 31 812 Antiporter Super Family AT2G13620 34.406 5.66e-158 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02957 - - mtr:MTR_5g074380 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02957 05 39844450 39847991 Tsu05g02957 05 39844450 39847991 ECH
Tsu03g00820 03 7462601 7466159 Tsu05g02957 05 39844450 39847991 PCT