Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02953 ATGGCTTATGCAATCCCCTTTATCATTTTAATGCAAGTTTGCACCATTATCAATGTTGTTGCTACAAGCAATGACTTGAAATTGAGACCAAAATTTTCATCTATTTTAGTCTTTGGGGACTCAACAGTAGACACAGGAAACAACAATTACATCAAAACATTGGCCAAAGGAAATCATTTACCATATGGAAGGGATTTTCCTAATCATGTACCTACTGGTAGATTTTCCAATGGAAAATTGGTTATTGATTTTCTTGCATCTACAATGAATCTCAAAGACAGTGTCCCTCCTTTTTTGGATCCTAACCTTTCAAATGAAGAGCTTCTTACAGGTGTTAGCTTTGCATCCGGAGGATCAGGTTTTGATGATTTGACAATAGCTTTATCTAGAGCTATATCAATTTCCAAACAAATTGAATATTTCAAAGATTATATGGTAAAAGTTAAAAGCATTGTAGGGGAAAAAGAAGCTAAAAATAGAGTTGGAAATGCTTTGGTGATTATTAGTGCTGGAACTAATGActtccttttcaatttttatgatattccaACTAGAAGGTTGGAGTTCAACATTAGTGAATACCAAGATTATATTCAAAGTAGACTTCAAATTTGCATTGAGGAACTATATGACCTTGGATGCAGAAAATTTGCTGTGACTGGGCTTCCAGCTATTGGTTGCATACCTGTTCAAATAACAGctaaatttgtaaatttaaagGATCGGAAATGTGTGGAGGATGAGAATTTAGAAGCTAAAgattacaacaaaaaattagCAAGAAGATTACTTAAATTACAAGCAGTGCTTCAAGGAAGCAGAATTATTTATACAAACATATATGATCCTTTGATTGGCCTTATTAATCATCCTCAAAAATATGGTTTCACAGAAACAAACAAAGGGTGTTGTGGAACTGGCTTATTTGAAGTAACTCCATTGTGTAATGAACTCACACCAGTTTGTAATGATGCTTCAAAATATGTATTTTGGGATAGTGTACATCCAACTCAAGCAACCTACAAATATATTGCTAAGTACTTAGAATTGGAAGTCCTGCCTAAGTTCCAATTTCATATGGATTATATATTTCATTGA 1098 0.3206 MAYAIPFIILMQVCTIINVVATSNDLKLRPKFSSILVFGDSTVDTGNNNYIKTLAKGNHLPYGRDFPNHVPTGRFSNGKLVIDFLASTMNLKDSVPPFLDPNLSNEELLTGVSFASGGSGFDDLTIALSRAISISKQIEYFKDYMVKVKSIVGEKEAKNRVGNALVIISAGTNDFLFNFYDIPTRRLEFNISEYQDYIQSRLQICIEELYDLGCRKFAVTGLPAIGCIPVQITAKFVNLKDRKCVEDENLEAKDYNKKLARRLLKLQAVLQGSRIIYTNIYDPLIGLINHPQKYGFTETNKGCCGTGLFEVTPLCNELTPVCNDASKYVFWDSVHPTQATYKYIAKYLELEVLPKFQFHMDYIFH 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02953 365 Gene3D SGNH hydrolase 22 352 IPR036514 -
Tsu05g02953 365 CDD SGNH_plant_lipase_like 34 348 IPR035669 -
Tsu05g02953 365 PANTHER GDSL ESTERASE/LIPASE EXL3 25 347 - -
Tsu05g02953 365 Pfam GDSL-like Lipase/Acylhydrolase 35 348 IPR001087 GO:0016788
Tsu05g02953 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 25 347 - -
Tsu05g02953 365 SUPERFAMILY SGNH hydrolase 34 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02953 Tsu-Chr5 39806405 39808571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02953 32 352 Pollen Coat Proteome AT1G75910 34.877 1.40e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02953 - - gmx:100817270 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02953 05 39806405 39808571 Tsu05g02953 05 39806405 39808571 ECH