Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02951 ATGAATGGAAAACCAGATACATATAGTCTGATTTCATGTGCTCCCTTCGCTTTGATGTCACTTAGTTTATCGAGGCAAATTCAGTGCGGATTTGAAGTGGATCTTATGTCCTTTTATCTAGGATGTTTAATTGCACAACTCATgaagattaattttttgttagcTATTGTTGGAATTTGTTACAGCTATTGTCTTATTGTTATTcgttcttctttttcttccttaAATGTTGCGCAAGAAACTCAGTGTCTTGTACTCGAAGAAAAACAAGTAGTCATTCAAGTTGATTCCGAACAACGAGAAAATACCAAGATGGAACTATTGTTGCAACAGTTCCTGACTTGTATGAAAGAGCTTAGCCATAACAATTCGAATATTGCCAATATGCTCTTGGAGAAGGTGAAAGGAAAGAATAAGTTGGTGGTTTCTGATCATAACTTCATACTTGATATCATTCCGGACAAAACAATCAATAACCTTCGTGAAACGGTTAAACTGATGGTGGATGCTGGGTTTGAGAAAGAGTGTTCCGACTTGTATATTAGTTTGCGTAAAGAATGGTTGGAagatttattaataaataaattattaggaTTGAGAAAGATGGGATTTAAGGATCACAAGATTGGAAAAAGGATTAAAGCTTCGAAGGTTgctcttaaaatattatttcctAGTGAGCGTCGCCTCTATGATAAGGTCTTCTCGGGATCCTTCTTTATATCATCTGATCTTTGGTTTTCTGAGGTTTGTCGTGGAGCAACGATACAATTGTTGAACTTTGCAGATTCGTTTGTGAATCAAAGTCCTTCGGCAAGGCGTTTGTTTAAAATCCTTGACTTGTTTGAGACACTCAGTGATCTCATTCCCGAATTTGAAGCATTGTTTACTGATTCCTTGGTGAATGAAGCAATACAAACTAAGAATAGATTGGGTGAAGTAAGTAGAGATATTTTCATGGAATTTGGCAATCTGATCTTTCTTACGCCGAATGCAGACTTAGATTGTTGGGTTGATGGTGGAGTTCATCCAATGACCTGCGAGGCTACAGGCTACATCGTGTTGGCTTTCAAGTCAAGACAGAAATTGGAGCAAGTTTTACGAGAATACTCCACGGTTGCTGCTAATGGAACGGGAACATCTTTATTCGACTCGCTGATGGAGCTGATAATGGAGAAGTTTGAGAGAAATTTGGAAGCTAAGTCACAAACTTGTGAGGACCCTGCTTTGCGGTATTTTTTCATGCTGAATAATATAAGTCTGATTAAGTACAAATTCAAAACCTTTTGGGATGATAGGTTCTGTAAAAACACAACGCAATACTTGGAATTCTATTGTAAAAGCTCATGGAGTAAGGttatagatattttaaaaatcgatATAAATGAGTCAGCGGCGTCCAATTCTGAAGCATATTCAATGAAAGGCAAGCTCAATCTGTTCAATCAGAAGTTTAGGGAGATGTGTGCAATTCAGTCTACATGGCGTGTTTTTGATGAACAGCTTaggaaacaaataataatttatgtgGAAACTATGTTGTTACCGGCTTATGAAAACTTCATTGCGAGGTTTGAGAATGTTCTTGGTAAAAATGCCGACGAGTATAGAATGTCTGACATTCAAGATCAACTCAATCATTTGTTTCTTTTACAGGATATTGATGTTGATTCTGTTAGAGGATCTGTTAGGaatcagttagttagttag 1710 0.3474 MNGKPDTYSLISCAPFALMSLSLSRQIQCGFEVDLMSFYLGCLIAQLMKINFLLAIVGICYSYCLIVIRSSFSSLNVAQETQCLVLEEKQVVIQVDSEQRENTKMELLLQQFLTCMKELSHNNSNIANMLLEKVKGKNKLVVSDHNFILDIIPDKTINNLRETVKLMVDAGFEKECSDLYISLRKEWLEDLLINKLLGLRKMGFKDHKIGKRIKASKVALKILFPSERRLYDKVFSGSFFISSDLWFSEVCRGATIQLLNFADSFVNQSPSARRLFKILDLFETLSDLIPEFEALFTDSLVNEAIQTKNRLGEVSRDIFMEFGNLIFLTPNADLDCWVDGGVHPMTCEATGYIVLAFKSRQKLEQVLREYSTVAANGTGTSLFDSLMELIMEKFERNLEAKSQTCEDPALRYFFMLNNISLIKYKFKTFWDDRFCKNTTQYLEFYCKSSWSKVIDILKIDINESAASNSEAYSMKGKLNLFNQKFREMCAIQSTWRVFDEQLRKQIIIYVETMLLPAYENFIARFENVLGKNADEYRMSDIQDQLNHLFLLQDIDVDSVRGSVRNQLVS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02951 569 Gene3D Exocyst complex component Exo70 84 553 - -
Tsu05g02951 569 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 550 IPR004140 GO:0000145|GO:0006887
Tsu05g02951 569 SUPERFAMILY Cullin repeat-like 110 549 IPR016159 -
Tsu05g02951 569 Pfam Exo70 exocyst complex subunit 212 546 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02951 569 PANTHER PROTEIN, PUTATIVE-RELATED 1 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02951 Tsu-Chr5 39802230 39803939 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02951 142 549 EXO70 exocyst subunit family AT5G58430 44.495 9.38e-104 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02951 - - lja:Lj2g3v2364680.2 535.798