Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02944 ATGCATTTAAAAGTATGGAGATTTATTGGTTTTACTTCATCAGTTGTTGGATTGCTTTGTTATGCTTTAAGCTCTTCCTTTATCCATTTATTTGGAACCTGGAATTTATTGAAGATATTTCTTTACACCATTTTCAGTTTCATCATTTGTCTGATAATTTTGTTCGCGAGAACCTGGAAAGACTCGAGAAGTCTTCGGTTTGAAGCTCATTCAGCATTTTTGGTATTGACAATCACCTCTGtgtattcttttttctctgataaaataataaatggaaAACCAGATGCATATAGTCTGATTTCATGTGCTGCCTTTTCTCTCATGTCACTCAGTTTATCGAGGCAAATTCAGTGCGGATTTGAAGTGGATCTTATGTCCTTTTATCTCGGATGTTTAATTCTACAACTcatgaaaattaattatttgttggCTATTGTTGGTGTTTGTTACAGCTATTGTCTTATTATTCTTCGTTCTTCATTCTCTTCCTTACATGTTATACCGGAACCGCAGTGTCTTGGACTCGAAGAACAAAGAGTAGTCATTCAAGTTGATTTACAACAAGAAGATACTGATAGTGGTCATACAAGTTTGGAATCGTTGTTACAACGGCTTCAAACTTGTATGAGAGAGCTTGAACAAAACAATTCCAATATTTCCAAGATGCTTATAGAAAACGTGAAAGGTAACTATAAATTGGTAGTGACTGACCACAACTTGATAACTGATGCACTTCCTCATGAAACAATCAATAACCTTCATGAAACAGCGAAATTGATGTTTGATGCTGGTTTTGAGAAAGTGTGTTTTGAGGTTTACAATGGCTACCGTAAGGAATGGTTGGAAAACTTGTTAGGAAAGATGGGATTTCAAGATTACGTGATAGGAAGATGGATTAAAACTTCAGAGGTTGCTCTCAGAGTTTTATTTCCCAGTGAGCGTCGACTCTACAATTGTGTCTTCTCGAATTCAATGTCTGCATCATCTGATCTCTATTTCTCAGAGCTTTGTCGTGGAGCGGTCACTGAACTACTGAACTTTGCCGATTCATTTGCAAATCGAAGCCCTTCAGCATGGCGTTTGTTTAAAATCCTTGACATATATGAGACTTTGTGTGATCTAATTCCTGAATTTGAATCATTGTTTCTTGATTCGTTGGTGAATGAAGCAATAAAAATCAAGAATAGATTGGGTGAAATAAGTAGAGACATTTTTATGGACTTTGGGAATCTGATATTCCTTACACCGGATGCGGAGTTTGATTGTTGGGCTGATGGTGGAGTTCATCCAATGACCTGCGCAGCCACTGGCTACATCATTATGGCTTTCTGGTCAAGACAAAACCTAGAGAAAATTTTACGACAATATCCCTTGGTTGTTGGTGATGGAGCTGGAACAACTTCTTTATTCCATTTGCAGATGGAGTTGATAATGGAGCAgtttgagagaaaattggaaGCTAAGTCACAAACTTATGAGGACCCTGCATTGCGCTATTTTTTCATGATGAATAATCTAGGGCACGTAAAATACAGATTGGAAACCTTTTGGGATGATAGGTTCTGTAAAAATGTGGAGCAATACTTTGAAATATATTGTAGGAACTCTTGGAATAAGGCGATAAGTGTTTTGAAGACGGATATGAATGAGTCAGTGGCACCAAATTCTGAAACAAATTCAATGAAAGATAAGCTCAATCTTTTCAATCAGAAGTTTAGGGAGATGTGTGGAATTCAATCTACATGGCGTGTTTTTAATGAGCAAGTAAGAAATTTCATAATAACTTCCGTAGAAAGCATTTTGTTGCCAGCTTATGAAAACTTCATTGGTATGTATCATAATACTGTTGGTAAAAATGCTGATGAGTATATCGAGTATGGAATATTTGACATTCAAGATCATCTCAACCGTTCATTTATATTACAGGATGTTGATTCTGTGAAAGGATTAGATGAAAATCAGTTAGTTAGCTAG 1974 0.3526 MHLKVWRFIGFTSSVVGLLCYALSSSFIHLFGTWNLLKIFLYTIFSFIICLIILFARTWKDSRSLRFEAHSAFLVLTITSVYSFFSDKIINGKPDAYSLISCAAFSLMSLSLSRQIQCGFEVDLMSFYLGCLILQLMKINYLLAIVGVCYSYCLIILRSSFSSLHVIPEPQCLGLEEQRVVIQVDLQQEDTDSGHTSLESLLQRLQTCMRELEQNNSNISKMLIENVKGNYKLVVTDHNLITDALPHETINNLHETAKLMFDAGFEKVCFEVYNGYRKEWLENLLGKMGFQDYVIGRWIKTSEVALRVLFPSERRLYNCVFSNSMSASSDLYFSELCRGAVTELLNFADSFANRSPSAWRLFKILDIYETLCDLIPEFESLFLDSLVNEAIKIKNRLGEISRDIFMDFGNLIFLTPDAEFDCWADGGVHPMTCAATGYIIMAFWSRQNLEKILRQYPLVVGDGAGTTSLFHLQMELIMEQFERKLEAKSQTYEDPALRYFFMMNNLGHVKYRLETFWDDRFCKNVEQYFEIYCRNSWNKAISVLKTDMNESVAPNSETNSMKDKLNLFNQKFREMCGIQSTWRVFNEQVRNFIITSVESILLPAYENFIGMYHNTVGKNADEYIEYGIFDIQDHLNRSFILQDVDSVKGLDENQLVS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02944 657 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 640 IPR004140 GO:0000145|GO:0006887
Tsu05g02944 657 SUPERFAMILY Cullin repeat-like 194 637 IPR016159 -
Tsu05g02944 657 Gene3D Exocyst complex component Exo70 177 644 - -
Tsu05g02944 657 PANTHER PROTEIN, PUTATIVE-RELATED 5 640 - -
Tsu05g02944 657 Coils Coil 195 222 - -
Tsu05g02944 657 Pfam Exo70 exocyst complex subunit 297 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02944 Tsu-Chr5 39783858 39785854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02944 235 639 EXO70 exocyst subunit family AT5G58430 42.989 6.55e-103 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02944 - - gmx:100788866 567.385