Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02943 ATGACAGCAAAAGCAGCAAACGAAATTAGGCTATATGCATCTGGTTTTGCGTTAGCTATATCAAAGAAAAAGGAGCAAACAGTGCTCTTCCTTCACTCATCTATTTGGAGGGTGGAACTTATTGAAGATATTTCTTTACAGTGTTTTCAGTTTAATCATTTGTCTAATGATTTTATTTGCAAACACGTGGCAAAAGTCAAGAAGTTTTCGATTCAAAGCTCATTCAGCATTTCTGAAAATCAATGTCTTGGACTCGAAGATCAACATCTAGTCATCCAAGTTGACTCACACCAATCGGAAAATATCAAGCAACGATTCTTGACTTGTATGAATGAGCTTAAGAAAAACAATATGAATATCGGTAAGATGCTTTTGCAGAAGGTGAAAGGTAACTATAAATTGTTTGTGACGGACCAAAACTTCATAATAGATGCACTTTTGCCTGAAACAATCAATAACCTTCATGAAACGGCTAAATTGATGATTGATGCTGGATTTGAGAGAGAGTGCTATGAGATTTACAACAGTTATCGTGAGGAATGGTTAGAAGACTTGTTAATCAATAAGTTATTAGCATTGAGAAAGATGGGATTTCAAGATTACGTGATTGGAAGATGGATTAAGACTTCCAAGGTTGCTCTTAAAATACTATTTCCCAGTGAGCGTCAACTATACGACCGTGTCTTCTCAGAATCCAATTCTGCATCATCTAATCTCTACTTCTCAAGGATTTGTAGCGGAGCGATGATTCAGCTACTGAATTTTGCGGTTGCTTTTGCAAATAGAAGCCCTTCAGCGTGGCGTTTGTTTAAAAACCTCAACTTGTTTGAGACGTTGTGTGATTTGATTCATGACTTTGAATCATTATTTCTTGATCGGTTGGTGAGTGAAGCAATACAAGTCAAGAAAATATTGGGTGAAATAAGTAGAGACATTTTCATGGAATTTGGGAATCTGATCTTTCTTACACCAGATGCGGAGTTAGATTGTTGGGCTGATGGCGGGGTTCATCCAATGACCTGTGAGGCAACTGGCTACATCGTTATGGCTTTCTGGTCAAGGCAAAATCTGGAGAAAGTATTACGCGAATATCCCTTTTTTGTTGAGGGAGTAAAAACATATTCTTTATTCTCTTCGCAGATGGAGCTTATAATGGAGCAgtttgagaaaaaattggaaactaaGTCACAAATTTACGAGGAACCTGCTTTGCGTTACTTTTTCATCATGAATAATCTAAGTCATATTGAGTACAAATTGGAAACCGTGTGGGATCATAAGTTGCGTAAAAACACGGAGCAATACTTTGAACTCTATTGTAGAAACTCATGGAATGAAGTGATAGATTTTTTGAAGATGGATATCAATGAGTCAGTTGTGTCTAACGTTGAAGGAAATTTGATGAAAGACAATCTTAGTTTGTTCAATCAGAAGTTTAAGGATACGTGTGGAATTCAGTGTACATGGCGTGTTTTTGATGAGAAGCTAAGGAAACAAATAATAACTTTCCTCGAAATCAAGTTGTTGCCAGCATACAAAaatttcattgttatttttcaGAATGTTGTTGGTAAAAATGCAGAGGAGTATATCGTGTATGAAATGTCTGACATTCAAGATCAACTCAATCATTTGTTTCTGTTAGAGGAAGTTGATTGTGTTCAAGAGGATTTGATGAAAACCAATTAG 1689 0.357 MTAKAANEIRLYASGFALAISKKKEQTVLFLHSSIWRVELIEDISLQCFQFNHLSNDFICKHVAKVKKFSIQSSFSISENQCLGLEDQHLVIQVDSHQSENIKQRFLTCMNELKKNNMNIGKMLLQKVKGNYKLFVTDQNFIIDALLPETINNLHETAKLMIDAGFERECYEIYNSYREEWLEDLLINKLLALRKMGFQDYVIGRWIKTSKVALKILFPSERQLYDRVFSESNSASSNLYFSRICSGAMIQLLNFAVAFANRSPSAWRLFKNLNLFETLCDLIHDFESLFLDRLVSEAIQVKKILGEISRDIFMEFGNLIFLTPDAELDCWADGGVHPMTCEATGYIVMAFWSRQNLEKVLREYPFFVEGVKTYSLFSSQMELIMEQFEKKLETKSQIYEEPALRYFFIMNNLSHIEYKLETVWDHKLRKNTEQYFELYCRNSWNEVIDFLKMDINESVVSNVEGNLMKDNLSLFNQKFKDTCGIQCTWRVFDEKLRKQIITFLEIKLLPAYKNFIVIFQNVVGKNAEEYIVYEMSDIQDQLNHLFLLEEVDCVQEDLMKTN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02943 562 SUPERFAMILY Cullin repeat-like 105 546 IPR016159 -
Tsu05g02943 562 Gene3D Exocyst complex component Exo70 87 551 - -
Tsu05g02943 562 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 548 IPR004140 GO:0000145|GO:0006887
Tsu05g02943 562 PANTHER PROTEIN, PUTATIVE-RELATED 64 548 - -
Tsu05g02943 562 Pfam Exo70 exocyst complex subunit 205 543 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02943 Tsu-Chr5 39777996 39781334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02943 136 546 EXO70 exocyst subunit family AT5G58430 43.578 2.83e-94 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02943 K07195 - lja:Lj2g3v2364680.2 511.916