Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02941 ATGCAGATTCATGTGTTTTGTTTCATCCGTTGTCGGACTGCTATGTTACGCTCTAAGCTCTTCCTTCAATCATCTATTTGGAAACTGGAACTTCTTGAAGgTAACGGAAAACCAGATTTGTACGATCTGATTTCCAGTGCTGCTTTTGCTATCATGTCgctttttctttcaaagcaAGCTCACTTGGGATTCGAGGTTGAtctcctatattttttttgcggATATTTAACTTTACAACTCATGAAGATTAAATTGGTTTTAGTCGGTGTTGGAATAATTTTCAGTTATTTCCTCATCATCCTTCGTTTTAATTTGGGTAATCCAACAGAAAGTGGCCGTCTTGGACTCCAATTCCAAGACCAAGCTTCTGTAATCATTCAAGTTGATGCAGATTCTGAACAATCCAGTACTGCTCAAGTGAATTTTAACCAAACTAATACTGCCACAGAAAGTGCTGAAAGTGTTCCAACAAATATGAATCCGGATGCTCAACAAGCAGACATGGATCTTGGACCGGTCACTCACGTCAATTTGTTgtcacaaaaaggaaaaagtgaTAGTGAATACATAAGTCTTGACGATTGTAAAAATGAGCTAGTTGAAATGAGTCATAAACTTAATCGCGTTATTTGGCAGCAGCTTCCAAGGATAGGGTCAAAAGTCTTTCCTGACTCCGGTAATTTTGACAGGAACAAGGAGATGACGGACATTAAGAATGACCTACACAAAACAGTGAAAAAAATGCTGGAAGATGGGTTTCAGACTGAGTGTATCAAGGTGTACAACATTTCTCGAAGCAAATTCCTTAACAAGTGCCTGTGTAGACTAGGATTGCAAGACCTCAACTTGTGGGATGTTGAAGATGAGAATGTTGGGAATTTGATTAGTACTTTCCACACAGCTTTAGGAATTCTTTTTCCCCATGAGAGTAGGCTTCTGCAACACATCTTTGCGGGGCTCAATCTTGAGTCTAGCATTCTTAACATGTTAGAATGGAAGAGggttgaaattgaattgtgGGTCAAATTTATGGTGTTGCAGTCTCGTATTCGCTCCAATTTTCTGCCAGAGGCTTCTCTTGGTTATGGGATTCATCCTCTTACCCGTGGAGTAATGAATTGCATTAGACGTGTTTGTGAAGTTACGGATAATATAGCTTATTTCGACATCCATTCGATCATACAGATGTTAGAGAGTACTTTGGATGCAAAATCCAGAAACTACATAAATCCTGCTTTCGGTTATCTTTTCACGCTGAATAACAATAGATATATGCAATTCATGGCAAGATATAAACCATTGCGACTCATTTTGGGAGATGATTGGCGTCAAATACATAAGTCAAAAGAGAGACAAAATATTAGAGACTATCTAAGATTTATATGGAATAAGGTTTTGAACTTAATGGAGAACAATGAGTCAATGGCTGCTAATGTTGCCGTAGAATCAATGAGATTGTTCCATCTACATTTTTCAGATATATGCAGAGTTCAGTTTACATGTTTTAGCGTCGAAAACAAGCTAAAGGAAAGAATAAGAAGGTCCATGAAAAAGATGTTGTTGCCACTGTATGAAAAATTCATTGTGAGGTTCAAAGATGTTGTTGGTGAGAATGTTGCTAATCAGCATATTAAATTCGGAATGTCAGACCTTGAAGATCGTCTCGATGGTTTATTTAGTGAACGTCAGTTTCTGAAAGAGCCTTGGAAGCGAGCCGTGGAAGCAAGTGGATTGAGGAAGCGAGCCGTGGAACCAAGTCGTCATCCATACATAGCCGACCACAATAGCCATTAA 1794 0.3718 MQIHVFCFIRCRTAMLRSKLFLQSSIWKLELLEGNGKPDLYDLISSAAFAIMSLFLSKQAHLGFEVDLLYFFCGYLTLQLMKIKLVLVGVGIIFSYFLIILRFNLGNPTESGRLGLQFQDQASVIIQVDADSEQSSTAQVNFNQTNTATESAESVPTNMNPDAQQADMDLGPVTHVNLLSQKGKSDSEYISLDDCKNELVEMSHKLNRVIWQQLPRIGSKVFPDSGNFDRNKEMTDIKNDLHKTVKKMLEDGFQTECIKVYNISRSKFLNKCLCRLGLQDLNLWDVEDENVGNLISTFHTALGILFPHESRLLQHIFAGLNLESSILNMLEWKRVEIELWVKFMVLQSRIRSNFLPEASLGYGIHPLTRGVMNCIRRVCEVTDNIAYFDIHSIIQMLESTLDAKSRNYINPAFGYLFTLNNNRYMQFMARYKPLRLILGDDWRQIHKSKERQNIRDYLRFIWNKVLNLMENNESMAANVAVESMRLFHLHFSDICRVQFTCFSVENKLKERIRRSMKKMLLPLYEKFIVRFKDVVGENVANQHIKFGMSDLEDRLDGLFSERQFLKEPWKRAVEASGLRKRAVEPSRHPYIADHNSH 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02941 597 SUPERFAMILY Cullin repeat-like 236 559 IPR016159 -
Tsu05g02941 597 Pfam Exo70 exocyst complex subunit 391 556 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02941 597 PANTHER PROTEIN, PUTATIVE-RELATED 33 560 - -
Tsu05g02941 597 PANTHER EXOCYST COMPLEX PROTEIN EXO70 33 560 IPR004140 GO:0000145|GO:0006887
Tsu05g02941 597 Gene3D Exocyst complex component Exo70 173 332 - -
Tsu05g02941 597 Gene3D Exocyst complex component Exo70 333 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02941 Tsu-Chr5 39772060 39774004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02941 235 561 EXO70 exocyst subunit family AT1G07000 26.139 1.08e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02941 - K07195 cam:101511504 417.927