Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02939 ATGGACTGGAGATTTGTAGGCTTTGCTTCAGCTGTTAGTGGCCTGCTTTGTTATGCTCTCAGCTCTTCCTTCAATCAACTATTTGGAAATTGGAATTTTCTGAAGATATTTATTTACACCGTTTTCAGTTTCATCATCTGCTTAGCGATTTTATTAGCAAGAACATGGCAACACTCGACAAGTCTTCAATTCAAAGTTCATTCAGCATTTTTGGTATTGACTATTACCTCTGTCTATTCCTTTTTCTCCGATAAAGATATGAATGGAAAACCAGATGCATATAGTATCATTTCATGTGCTTCCTTCGCTGTCATGTCACTCAGTTTATCACGACAAATTCAATGTGGATTTGAAGTGGATCTTATGTACTTCTATCTTGGACATTTAATTGTACAGCTCATGAAGATTAAATTTCTGTTAGCTATTGTTGGAGTTGGCTTCAGCTACTGTCATATTATTATCCgttcttcattttcttccttaaaTGTTGCACAAGAAACTCGGTGTCTTGAACTCGATGTGCAGCAAGTAGTCATTCAAGTTGATTCACAACAACGAGAAAATACTTGTAGAGGTTGCACTATGCAACACTTTCATAtaaatttggaatttttgttGCAACAGTTCCAAACATGTACGAAAGAGCGTTTGGAAAAGGTGAAAGGTAACTATAAATTTGTAGTGACTGACCACAACTTCATAACTGATGCGCTTCCTCACGAAACAATCAATAACCTTCAAGAAACGGTGAAATTGATGATGGATGCTGGATTTGAGAAAGAGTGTTATGAGGTTTACAACAGTTACCGTAAGGAATGGTTGGAAGACttgttaataaataaattattaagatTAGGAAAGTTGGAATTTCAAGATTATATGATTGAAAGATGGATTAAAACATTAGAGGTTGCTCTCAGAGTACTATTTCCCAGTGAGCCCCAACTCTACAGTCGTGTCTTCTCGGATTCAACATCGGCATCATCTGATCTCTATTTCTCAGAGGTTTGTTCTGGAGTGACGATTGAACTTCTAAATTTTGCTGATTCATTTGCAAATTGA 1062 0.3512 MDWRFVGFASAVSGLLCYALSSSFNQLFGNWNFLKIFIYTVFSFIICLAILLARTWQHSTSLQFKVHSAFLVLTITSVYSFFSDKDMNGKPDAYSIISCASFAVMSLSLSRQIQCGFEVDLMYFYLGHLIVQLMKIKFLLAIVGVGFSYCHIIIRSSFSSLNVAQETRCLELDVQQVVIQVDSQQRENTCRGCTMQHFHINLEFLLQQFQTCTKERLEKVKGNYKFVVTDHNFITDALPHETINNLQETVKLMMDAGFEKECYEVYNSYRKEWLEDLLINKLLRLGKLEFQDYMIERWIKTLEVALRVLFPSEPQLYSRVFSDSTSASSDLYFSEVCSGVTIELLNFADSFAN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02939 353 Gene3D Exocyst complex component Exo70 173 353 - -
Tsu05g02939 353 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 351 IPR004140 GO:0000145|GO:0006887
Tsu05g02939 353 SUPERFAMILY Cullin repeat-like 226 352 IPR016159 -
Tsu05g02939 353 PANTHER PROTEIN, PUTATIVE-RELATED 3 351 - -
Tsu05g02939 353 Pfam Exo70 exocyst complex subunit 296 352 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02939 Tsu-Chr5 39756454 39757515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02939 228 352 EXO70 exocyst subunit family AT5G58430 49.254 7.73e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02939 - - mtr:MTR_5g073960 477.248