Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02937 ATGAACTATCAAAGAAACTCATGGAATAAGGTATTGGAGTTTATGAAGTTGGACAACAATGCATCAATGCAACCTAATGAGGAAGCAAATTCAATGAAAGATAAGTTAAAATCATTCAACAAGCTCTTTGGGAAAATATGCAGGGTTCAATCTTCATGGTTTATCGTTGATAAACATCTTAAGAGAGAAATAATAACTTCCATTGTGAAACTCTTGTTGCCAGCTTATGCAAAATTCATTAGAAGGTTTCAGAGAGTTCTTCAGTTTGGTAAGAATGCtgataaatatattaagtaTGAAATGGAAGATATCGCAACGGGACTAGATGATTTGTTTCAGGGAAGTAGTAAATCCGATTAA 360 0.325 MNYQRNSWNKVLEFMKLDNNASMQPNEEANSMKDKLKSFNKLFGKICRVQSSWFIVDKHLKREIITSIVKLLLPAYAKFIRRFQRVLQFGKNADKYIKYEMEDIATGLDDLFQGSSKSD 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02937 119 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 113 IPR004140 GO:0000145|GO:0006887
Tsu05g02937 119 Pfam Exo70 exocyst complex subunit 2 109 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02937 119 Gene3D Exocyst complex component Exo70 1 116 - -
Tsu05g02937 119 SUPERFAMILY Cullin repeat-like 2 112 IPR016159 -
Tsu05g02937 119 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02937 Tsu-Chr5 39753729 39754088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02937 1 118 EXO70 exocyst subunit family AT5G58430 50.000 1.90e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02937 K07195 - gmx:100803694 137.117