Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02935 ATGCATACAAAGGTATGGAGAGTTATCGGCTTCACTTCTGCTGTTGTTGGATTGGTTTTTTATGCTCTAAGCTCTTCCTTCAACCATCTATTTGGAAATTGGAATTTGTGGAAGATTATTCTTTACAGTGTTTTGAGCTTCATCATTAGCCTCATGATATTGTATGCAAATTTATGGAATTGCTCGAGAAGTCTTCGCTTTAGAGCTCATACGGCATTTCTGGTATTGACAATAACCTCTgtctattcatttttcttcGATAAAGTAGTGAATGGAAAACCAGATGCTTATAGCTTGATTTCATGTGCCGCTTTTTCTATCATGTCGATGAGCTTATCGAGGCATTCTCAGTGCGGATTTGAAGTGGATCTTCTTTACTTTTTTCTCGGAAGTTTCACTGTGTTACTCATGAAGATTAAATTGCCGTTAGTCTTTGTTGGAGCAGGTTTCAGCTATTCTCTTATTATTATTCgttcttctctttcttccatAAATAATGTAGTCGAAAACGAGTATTTTGGAGTCCGAGGTGAAAATTCAGTAGTCATTGAAATGGATTCACTACTAAGGCCTAGTAATGATTATTCTCTTATGATGCAAAAACTTATGACTTGTACTACTGCAATTCAACAGGAAATTTCAAATCTCATTAACAGGCACGTAAAGGAATACATTCAAGATAGGAGTAAATCGTTTCGTAGGTGTGATTTCGTAATGGATACTCTTCTGTTATCAAAGATGCATAATCTTCATGAAATTGTGAAGTTGATGATAGATGCTGGATATGAGAAAGAGTGTTCTCATGCGTATAGTAATTGGCGGAAGCTATTTTTGCAGGAGTGtctgataaataaaatatttgtgttGCAGGATGCAAAGATCAACATCGAGAATGAGCGTAAAACGGAACAATATGTAGATGCCAAGATTGGAAGATTGATGACTGCATTGGATGTAACTATGACATGCTTGTTTCCCATTGAACAACAGCTCTGTGATCGTGTCTTCTCGGGGTTCGCCACTGTTGGTTCTAATTGTTTCATTGAGGTTTGCCAAGAAACAACGTTTCAGCTGCTGAATTTGGCAAATTCAGCTGGTTCCGGGAGCCCTTCAAAATGGTGTTTGCTCAAGAAACTAGACATATTTAAGCAGTTACATAGTCTAATTCCGAAATTCCACTCTTTATTTCCAGATTCGACATTACTGAACCAAGCCATCAAAGTAAAGAATAGATTAGGAGAAGCTAGCAGAGACCTTTTCAAGGATatgcataattttattttcaaagttCCAGCAGAAGATCTAGTTGATTCATCTTATGGCCAACGTCATCAAATGACTATCGAGGTCATGAGCTACGTGACTTGTGTTTGCAGGTCAAAGCGGACGCTGGAACAAATTTTACAAGAATACTCCAAGGTTGACAATGAAGTGGAAtcatcttctttcttcttgAAGCAGATGGAACTGATAATCGGGATGTTACAAAACCAATTGATATCCGAGTCCAAAAATTACAATGACCTTGCTTTGCGTCATATTTTCATGATAAATAATAGGTCGCACATAGAAGCTATGAACAAAAGCTGGGAATTGGAAACAATTTTGGGGAATGAGTGGTTCCAAAATAACATagaaaaaatccataaaaaccTTGAGCTATATAAAGGAAGTTCATGGAACAAGGTGATGGACTTTCTGAAGCTGGAGAACAGTGACAATACTACTGACGACGTAATGAAAGAGAAGATTTGTTTGTTCAACAGTCACTTTGAAGATATATGCAGAGTTCAGTCTGAATGGTTTGTATATGACAATAAGCTAAGGGAAGAAATAATATCATCTGTGGGAAACATCTTATTGCCAGCATATGGAATCTTTGTTGGGAGGCTCCACGATATTCTCGGTAACCAAGCTTATAAATACATCAAATATGGAATGCTTGAGATTCAAGATCTACTCAACAATTTGTTCCTGGGAAACGAAAATATATga 1995 0.3534 MHTKVWRVIGFTSAVVGLVFYALSSSFNHLFGNWNLWKIILYSVLSFIISLMILYANLWNCSRSLRFRAHTAFLVLTITSVYSFFFDKVVNGKPDAYSLISCAAFSIMSMSLSRHSQCGFEVDLLYFFLGSFTVLLMKIKLPLVFVGAGFSYSLIIIRSSLSSINNVVENEYFGVRGENSVVIEMDSLLRPSNDYSLMMQKLMTCTTAIQQEISNLINRHVKEYIQDRSKSFRRCDFVMDTLLLSKMHNLHEIVKLMIDAGYEKECSHAYSNWRKLFLQECLINKIFVLQDAKINIENERKTEQYVDAKIGRLMTALDVTMTCLFPIEQQLCDRVFSGFATVGSNCFIEVCQETTFQLLNLANSAGSGSPSKWCLLKKLDIFKQLHSLIPKFHSLFPDSTLLNQAIKVKNRLGEASRDLFKDMHNFIFKVPAEDLVDSSYGQRHQMTIEVMSYVTCVCRSKRTLEQILQEYSKVDNEVESSSFFLKQMELIIGMLQNQLISESKNYNDLALRHIFMINNRSHIEAMNKSWELETILGNEWFQNNIEKIHKNLELYKGSSWNKVMDFLKLENSDNTTDDVMKEKICLFNSHFEDICRVQSEWFVYDNKLREEIISSVGNILLPAYGIFVGRLHDILGNQAYKYIKYGMLEIQDLLNNLFLGNENI 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02935 664 Gene3D Exocyst complex component Exo70 179 663 - -
Tsu05g02935 664 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 659 IPR004140 GO:0000145|GO:0006887
Tsu05g02935 664 Pfam Exo70 exocyst complex subunit 315 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02935 664 PANTHER PROTEIN, PUTATIVE-RELATED 5 659 - -
Tsu05g02935 664 SUPERFAMILY Cullin repeat-like 199 658 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02935 Tsu-Chr5 39747145 39749139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02935 236 660 EXO70 exocyst subunit family AT5G58430 38.710 2.28e-89 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02935 - - mtr:MTR_5g074130 715.687