Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02934 ATGGAAGGGGTTCTATTAATGAGGTATATTGCTATCAAGACACATTCCCCCCAAAATGAGATGGGTAAGTCAGCTTGGAATCTTAAGGCTCATGCCACATTGATCAAATCCATAAGCTCTATCCCAGAGGTCAATCTAGCTGCTCCAGCCGACGGTGGGCATCATCCTATCATGTACAATGTCACAGACTATCTGGTTTCTGCTATCAAATCGCAACAAATCAAGTTTATTAATGCAGACAGAGCATTTACACAAACAGAGGAGCCATTGAAACAGTTAGAGAGCATTTTGGAATGGAAGTCTAAAAAATATGTGGACACTTCTTTGCATCATTTTTTCATGATGAATAATTGGAGGTATTTAGAAGTTGCAATTCAAAGAAGGGAATTGAAtgaaatttttggaaatatttgGTGCCAAAAATTCAGAGTAAAAGTTCAACAAAAGCTTGAACTCTATCAAAGAAACTCATGGGATAAGATGTTAGATTTTTTGAAGTTCGATATCAATGATTCCTCCATGGAAATTAATTTTTCCGTAGATTCGATGAAACAAAACCTCAGTTATTTTAACCTGCACATTGCAGAGACACTCAGAATTCAGTGCATATGGTCAGTTCATGATGAAAAGCTAAGGGAAGAAATAATTTCATCTCTCAAAAACATCTTGCTGCCAGTGTATGGAACTTTCATTGGGAAGTTTCAGGAGTTTCTTAAAAACAATGCTTACGAGTATATCGAGTATGGAATTTTTGATATTGAAGATGTACTTGATAGTTTGTTTCTTCGAAACAAGACTGATGAATGA 807 0.3544 MEGVLLMRYIAIKTHSPQNEMGKSAWNLKAHATLIKSISSIPEVNLAAPADGGHHPIMYNVTDYLVSAIKSQQIKFINADRAFTQTEEPLKQLESILEWKSKKYVDTSLHHFFMMNNWRYLEVAIQRRELNEIFGNIWCQKFRVKVQQKLELYQRNSWDKMLDFLKFDINDSSMEINFSVDSMKQNLSYFNLHIAETLRIQCIWSVHDEKLREEIISSLKNILLPVYGTFIGKFQEFLKNNAYEYIEYGIFDIEDVLDSLFLRNKTDE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02934 268 Gene3D Exocyst complex component Exo70 24 268 - -
Tsu05g02934 268 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 262 IPR004140 GO:0000145|GO:0006887
Tsu05g02934 268 Pfam Exo70 exocyst complex subunit 47 258 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02934 268 PANTHER PROTEIN, PUTATIVE-RELATED 13 262 - -
Tsu05g02934 268 SUPERFAMILY Cullin repeat-like 46 261 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02934 Tsu-Chr5 39737743 39740341 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02934 47 266 EXO70 exocyst subunit family AT5G58430 37.339 1.38e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02934 - K07195 mtr:MTR_5g073620 300.441