Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02932 ATGACACATATTCTAATCCAAATTTGGAGATGGTTGATGCAGCCAAAGGTGTGGAGATTTATAGGCTTTGCATCAGCTGTTGTTGGACTTCTCTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGATTGGAATTTGCtgaaaatatttctttatattgTTTTCAGTTTCATCATATGCTTTGTGATTTTATTTGCAAAATTATTGCAACATTCTAGAAGTCTCCGGTTCAAAGCTCATACAGCATTTTTGGTATTGACAATCACATCTGTCTATTCCTTTTTCTTTGATAAAGTGATGAATGGAAAACCAGATGCATATAGTTTAATTTCATGTGCTGCTTTTGCTATCATGTCACTCAGTTTGTCGAGGCAAACTCAGTGCGGATTTGAAATCGATCTTCTTTATTTCTTCCTCGGATGTCTAATTGTACAACTCATGAAGATTAAATTGCAGCTATTTATTCTTGGAGCAGGTTTTAGCTACTCTCTTATTATTCTCCgttcttttttctcttcaattgaCGCTAGAGGAGATGATCAGTACTCTCAACTCCAGGATGAAAATTCAGTGGTTCTTTATATGAATTCTCTACAACTCGCCAATATTGATATCGCCAGTGCTAGCGATAGCAATAGAATCGATTCAACACAATTGGTGACCGCTAATGATATTAGTAGTGTGATGGAACAACTCATGGCCTTTGTGAAGGCGCTTCATTACGAAAGTAAACTATGCTCTGGGTTCGAGAAAGATTTTTCCGTTGTGTACAATAGTTGTCGGAGGGAATGCTTGGATAAGTGCCTAAATAGATTATTCAGTTTAGAAAAGCACAACATCGAGGAAGTTCATACTATCCCGTGGAAAGAACTTGAAGACAATATTGAAAGTTGGATTTGTGCTTCCAATGTTGCTCTCAAGATGCTTTTCCCTGGCGAGCGACAACTCTGCAACCGCATCTTCTTTGGATTCTCATCTGTTGCTGATTTCTCTTTCCTGGACATTTGCAAGGGATGGACCATTCAACTTGTGACTTTTGTCGATGCTATTGTCACCAGAAGCCATTCTCCAGAGCGTTTGTTTAAAATTCTAGAGGTGTTTCAAACATTGTGTGACCTAATTCCGGAATTTGAGTCATTATTTTGTGATCAATACAGTGTATCACTAATCAATGAAGCAATGACCATATGGAAGAGACTCAAGGAATCAATCAAAAGTATTTTCATGGAGTTGCAGTGTTTGATTAGCCAAGATCAAGTTAACGTGACAGTTAATGGTGGCGGTCTTCACCCGATTACCCAATACATGATGAACTACCTAGGTGTAGTTTGTCAATCCCGACGAACACTAGAGCAAGTGTTTGAAGATTCCTCATTTTCTGGGACGATTCATAGGATTATGGACATATTGGAGAGTAATTTGGAAATAAAGTCCAAATGCTACGAGGATCCTTCTTTACGATATATTTTCTTAATGAATAACAACACGTATATAGTTCAAATGACCAAAGATAATGAATTGGGAACCATTTTGGGGTATGATTGGCTCCAAAAACACGCTCTGAAAGTTTGGCATTACTATGGTAGGGAAGTTCAACAATCATCGCACAAAACCCGACACTACGATGGTAGGGAAATTCTACAATCATTGTACAACAACCGACATATTGGTGAAATAGATTCGAGCAATGTGAAAGGTTCCGAAGGATCAAAGGGGTATGAAAGAGATGTGCAGTTGATAGAAGCATCACCTACTCAACTAGAAAGAATTAGGACAAAGGACTTGGAGACAGAGATAAGAACAATAGTAATCTCTCCCTCACAACAGCATGGGATGGCTCATAAAATGTCACCAGAAGATGGGTTTACCTGGAAAAAATATAAGGAGAAAGAGATACTTGACTTCAAATACCCGAGGAGTTACTACAGGTGCAACCATTCAGTATTAAGTCCATTCAAGAAGAAAGTACAACAACTTGATGACAATCCAAACATGTTTGAAGTAACATACAAGGGTGGACATTCCTGCTGCCTGTCCTTAAAAAAGCCATCATTAATTTTACCACAACGAAAAATCAGGAATATCTCAAACTCAAAGGATATCACTCAAACCCCTATGCCTCCATCATCAACTTCATATTCTAAGTGGCTTTCATCCACCACACCAGTCAAATCCATAAGCTCTATCCCAGAGGTCAATCTAGCTGCTCCAGCCGACGGTGGGCATCATCCTATCATGTACAATGTCACAGACTATCTGGTTTCTGCTATCAAAACGCAACAAATCAAGTTTGTTAATGCAGACAGAGCATTTACACAAACAGAGGAGCCATTGAAACAGTTAGAGAGCATTTTGGAATGGAAGTCCAAAAAATATGTCGACACTTCTTTGCGTCATTTTTTCTTGATGAATAATTGGAGGTATTTAGAAGTTGCAATTCAAAGAAAGGAATTGAgtgaaatttttggaaatatttgGTGCCAAAAATTCAGAGTAAAAGTTCAACAAAAGCTTGAACTCTATCAAAGAAACTCATGGGATAAGATGTTAGATTTTTTGAAGTTCGATATCAATGACTCCTCCATGGAAATTAATTTTTCCGTAGATTCGATGAAACAAAACCTCAGTTATTTTAACCTGCACATTGCAGAGACACTCAGAATTCAGTGCATATGGTCAGTTCATGATGAAAAGCTAAGGGAAGAAATAATTTCATCTCTCAAAAACATCTTGCTGCCAGTGTATGGAACTTTCATTGGGAAGTTTCAGGAGTTTCTTAAAAACAATGCTTACGAGTATATCGAGTATGGAATTTTTGATATTGAAGATGTACTTGATAGTTTGTTTCTTGGAAATAAGACAGATGAATGA 2877 0.3709 MTHILIQIWRWLMQPKVWRFIGFASAVVGLLCYALSSSFNYLFGDWNLLKIFLYIVFSFIICFVILFAKLLQHSRSLRFKAHTAFLVLTITSVYSFFFDKVMNGKPDAYSLISCAAFAIMSLSLSRQTQCGFEIDLLYFFLGCLIVQLMKIKLQLFILGAGFSYSLIILRSFFSSIDARGDDQYSQLQDENSVVLYMNSLQLANIDIASASDSNRIDSTQLVTANDISSVMEQLMAFVKALHYESKLCSGFEKDFSVVYNSCRRECLDKCLNRLFSLEKHNIEEVHTIPWKELEDNIESWICASNVALKMLFPGERQLCNRIFFGFSSVADFSFLDICKGWTIQLVTFVDAIVTRSHSPERLFKILEVFQTLCDLIPEFESLFCDQYSVSLINEAMTIWKRLKESIKSIFMELQCLISQDQVNVTVNGGGLHPITQYMMNYLGVVCQSRRTLEQVFEDSSFSGTIHRIMDILESNLEIKSKCYEDPSLRYIFLMNNNTYIVQMTKDNELGTILGYDWLQKHALKVWHYYGREVQQSSHKTRHYDGREILQSLYNNRHIGEIDSSNVKGSEGSKGYERDVQLIEASPTQLERIRTKDLETEIRTIVISPSQQHGMAHKMSPEDGFTWKKYKEKEILDFKYPRSYYRCNHSVLSPFKKKVQQLDDNPNMFEVTYKGGHSCCLSLKKPSLILPQRKIRNISNSKDITQTPMPPSSTSYSKWLSSTTPVKSISSIPEVNLAAPADGGHHPIMYNVTDYLVSAIKTQQIKFVNADRAFTQTEEPLKQLESILEWKSKKYVDTSLRHFFLMNNWRYLEVAIQRKELSEIFGNIWCQKFRVKVQQKLELYQRNSWDKMLDFLKFDINDSSMEINFSVDSMKQNLSYFNLHIAETLRIQCIWSVHDEKLREEIISSLKNILLPVYGTFIGKFQEFLKNNAYEYIEYGIFDIEDVLDSLFLGNKTDE 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02932 958 SUPERFAMILY Cullin repeat-like 213 530 IPR016159 -
Tsu05g02932 958 ProSiteProfiles WRKY domain profile. 621 677 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g02932 958 Gene3D WRKY domain 609 680 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu05g02932 958 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 740 951 - -
Tsu05g02932 958 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 24 529 - -
Tsu05g02932 958 Pfam Exo70 exocyst complex subunit 780 948 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02932 958 Pfam Exo70 exocyst complex subunit 299 528 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02932 958 Gene3D Exocyst complex component Exo70 174 577 - -
Tsu05g02932 958 Gene3D Exocyst complex component Exo70 726 958 - -
Tsu05g02932 958 SMART WRKY_cls 620 680 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g02932 958 Pfam WRKY DNA -binding domain 621 678 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g02932 958 SUPERFAMILY WRKY DNA-binding domain 618 678 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu05g02932 958 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 529 IPR004140 GO:0000145|GO:0006887
Tsu05g02932 958 PANTHER EXOCYST COMPLEX PROTEIN EXO70 740 951 IPR004140 GO:0000145|GO:0006887
Tsu05g02932 958 SUPERFAMILY Cullin repeat-like 738 951 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02932 Tsu-Chr5 39711459 39715663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02932 737 956 EXO70 exocyst subunit family AT5G58430 37.768 3.62e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu05g02932 Exo70 9.7e-59 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02932 - K07195 cam:101500706 1039.25