Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02928 ATGATGAATGGGAAACCAGATGCATATAGCCTCATTTCAAGTGCTGCCTTTTCTATCATGTCACTAAGTTTGTCGCGGCAAACTCAGTTCGGATTTGAGGTTgatcttctttatttttttcttggaTCTCTAATTGTACAACTCATGAAGATTAAGTTGCAGTTATTCATTGTTGGAGCTGGTTTCAGCTATTCCCTTGTTATTCTTCGTTCTTCCTTTCCTTCCATAGACGCAGGGCGAGATCATGAGTACCCTGAAATCCAAGATGAAAATCCGGTAGTCATTGTCATTTCACCACACTTAGCTAGTACTGATATTGCTAGCAGCATGATGGAACAATTCAGGACTTATGTGTACGCAATTCAGAAGGAAAATTTTCATGTCATCAACACGCTTTCGGAACAGCTAAAGGAATACTTTGCCGATGCATCTGAATTTGTGTTATCTGGAGGCCGCATGGACTCACTGTTCAAACCAATAGAAAATTTGATTCTCATGATGGATATGGTGCCTCCTGAAACTATGAACAAACTCCATGAAATGGCAAAGTTGATGGTGAGCACTGGTTTGGAAAAGGAGTGCTATAATGTGTACAGCAGTTGCCGGAGGGAATGGTTGGAGGGCCTAGTGAAACAATTATTAGGTTTAGAGAATCTTACTATTGAAGACGTTAACAAGATTTCATGGAATGATCTTAAACACCAGATTAGAAGCTGGATTAAGGCTTCAAAGGTCGCTCTCAAGATATTGTTCCCCACCGAGCGACGACTATGCGATCTTATTTTCTTCGGATTCTCCACAGTTGCCAATCTCTCCTTCACAGAGGTTTGTTGGGGGTGCACTATCCATTTGCTGAATTTCAGTGAAGCAGCAGCCAACAGAAGTCGTTCGCCTGATTTGTTATTTACAATTCTCGACATGTTTGAAACATTGCGTGATTTAATTCCAGAGTTTGAGTCTCTTTTTTGTGATCAGTTCAGCGTATCCCTAAGGAATGAAGCAAACACAACTTTGAAGAAATTGGCAAAAGCAATTGTGGAGATTTTCATGGAGTTGGAAAATGTAATTCGCCAAGATCTAGCAAAGACGGCTGTTCCCGATGGTGGGATTCATCCCCTTATCCGTTACACGATGAAGTACCTCTGCCTCATTTGTGACTATCGACCGACGCTAGAGCAGGTGTTTGAAGACCATGGACATTTGTTGAGGGAATACCCTAAGCTTGATGATAGCGTGCCATCCTCGTCTTCTCTTTCACTGCATATGGATCGAATTATGGAGGTATTAGAGAGTAATTTGATAGCCAAGTCCAAAATCTATAAAGACTCTGCTTTGGGCTATGTTTTCTTAATGAATAGCAACGAATACATACTTCAGAAGACAAAGAACAACGATATAAGGAAACTTTTATCAGATGATGTGATTCAAAAACACAAAGCAAATGTTTTGTACAACTACGACCAATATCGGAGAAGCTCATGGCAACAAGTGATGAGATTTCTAAAGTGGGACAACAATGGATCAGTATCTCCTAAAATGGTAGTGAAATCAATGAAGAAGAAGCTCAAATCGTTCAACATACTTTTTGAGGAAATATGCAGGGTTCAGTCTTTGTGGTTTATCTTGGATGAGCATCTTAAGGAAGATATCATAActaatattaagaaaaagttgTTGCCGATGTATGGAAACTTCATTGGGATGTTCCAGAAGAGTGTCGAGGAACTTGGAAAACATGctgataaatatattatgtatgGAATGGAGGACGTTGAAGCAAGACTCGACGATTTGTTTCGTGGAAGCAGTGCATCAACGGATAGGTGTTCAAAAGTGTTTTGGaaaactatttaa 1854 0.3894 MMNGKPDAYSLISSAAFSIMSLSLSRQTQFGFEVDLLYFFLGSLIVQLMKIKLQLFIVGAGFSYSLVILRSSFPSIDAGRDHEYPEIQDENPVVIVISPHLASTDIASSMMEQFRTYVYAIQKENFHVINTLSEQLKEYFADASEFVLSGGRMDSLFKPIENLILMMDMVPPETMNKLHEMAKLMVSTGLEKECYNVYSSCRREWLEGLVKQLLGLENLTIEDVNKISWNDLKHQIRSWIKASKVALKILFPTERRLCDLIFFGFSTVANLSFTEVCWGCTIHLLNFSEAAANRSRSPDLLFTILDMFETLRDLIPEFESLFCDQFSVSLRNEANTTLKKLAKAIVEIFMELENVIRQDLAKTAVPDGGIHPLIRYTMKYLCLICDYRPTLEQVFEDHGHLLREYPKLDDSVPSSSSLSLHMDRIMEVLESNLIAKSKIYKDSALGYVFLMNSNEYILQKTKNNDIRKLLSDDVIQKHKANVLYNYDQYRRSSWQQVMRFLKWDNNGSVSPKMVVKSMKKKLKSFNILFEEICRVQSLWFILDEHLKEDIITNIKKKLLPMYGNFIGMFQKSVEELGKHADKYIMYGMEDVEARLDDLFRGSSASTDRCSKVFWKTI 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02928 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 600 IPR004140 GO:0000145|GO:0006887
Tsu05g02928 617 SUPERFAMILY Cullin repeat-like 162 599 IPR016159 -
Tsu05g02928 617 Pfam Exo70 exocyst complex subunit 238 597 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02928 617 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 2 600 - -
Tsu05g02928 617 Gene3D Exocyst complex component Exo70 97 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02928 Tsu-Chr5 39700877 39702730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02928 158 605 EXO70 exocyst subunit family AT5G58430 53.111 4.05e-157 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02928 K07195 - cam:101502613 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02928 05 39700877 39702730 Tsu05g02928 05 39700877 39702730 ECH