Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02926 ATGTCTGAAAACGGTGAAGAGAAATTACTCGCTGTGGCACGCCACATAGCAAAAACGCTAGGTCATAACAATAACATGGCTGATGATATTCTTCAAATTTTCTCAAACTTCGATGGAAGATTCTCGAAGGAAAATCTCTCTGAGAAAGTTGCTGTTACAGATACAGATCCAAGAGCATGCGCCGCACTGGATCACTGTCTCAAAAACCTCGACCGTCGGATCTCTCACTTTGTTTCCTCTGATCACCCTATCTGGGCGGATTCCGCCGACGCCGGTGCTTTTCTTGACGCCGTTGACGACTTAATCGCCTCCGTTGCTGAGTGGAACCATCTCACCGGTGATAAATCCATCGCCACGTGTCTTGTTCGTGCTGAAGATATGCTTCAGCATGCTATGTTTCGTCTTGAGGAGGAGTTCCGATCTCTCATGGAACGCGGCGGTGAGTCGTTTGACCTAACGCAACCGTATCGGAACAGTGATTCAGCTGGAAACTTGTCGAATTTACCGTTTGATTCAgaagaagaggatgaagaaattgaaaacgGTGGAGAAGAAGAGGATCTGATTCCAGTTGCGATGCCGGTAACTGATTACGACATCGTGATTGATGCGTTACCGTCGGCGACGATTAACGATCTTCATGAGATCGCTAAGCGAATGGTTGCTGGTGGATTTGGTAAAGAGTGTTCTCATGTGTATAGCAGTTGTAGAAGAGAGTTCTTAGAGGAAAGTCTCTCGAGATTAGGGTTACAGAAGCTTAGCATCGAAGATGTTCACAAGATGCCATGGAATGATATAGAAGACGAGATTGAAAGATGGATTAAAGCTTCCAATGTTGCTTTAAAGATACTTTTCACCAGCGAGCGACGACTCTGTGATCGTGTGTTTTTCGGATTCTCTTCAGTTGCAGATTTCTCGTTTATGGAGGTTTGCAGAGGTTCTACTGTTCAGTTGTTGAATTTTGCTGATGCTGTTGCCATTGGAAGCCGTTCGCCTGAACGGTTGTTTAAAATCCTCGACGTGTTTGAAACATTGCGTGACCTAATTCCTGAATTTGAGGTCCTATTTTGTGATCAGTATAGTGTGTCTTTAAGAAATGAAGCATTGACTATATGGAAGAGATTGGGGGAAGCGATTAGAGGCATTTTTATGGAGTTGGAGAATTTGATTCGAAGAGATCCGGCTAAGGCGGCTGTTCCCGGTGGTGGACTTCACCCGATTACCCGATATGTGATGAACTACCTCCGTGCTGCGTGTCGGTCAAGGCAGACATTGGAGCAAGTGTTTGAAGATTATGGACATCCATTGAAGGAATACCCTAAAATTGATGATAGAATGTCTTCATCTTCCTCTCTATCAGTGCAAATGGATTGGATTATGGAGCTATTAGAGAGCAATTTAGAAGCCAAATCGAAAATCTATAAAGACCCTGCATTGTGCTATGTTTTCTTGATGAATAACTGCAGGTACATTGTTCAAAAGGCTGAAGATAGTGAATTAGGAGCTCTTTTAGGTGATGATTGGATCAAAAAACACACTGCAAAAATTCGGCAATACCATGCGCAGTATCAAAGAAGCTCATGGAATAGGGTGTTTGGGTTTTTGAAGGTTGAATACAATGGATCAATCCCACCTAATGGGGTAGCCAAGTCTATGAAAGAGAAGCTGAAATCATTCAACATGATCTTCGATGATATATGCAGGGTTCAATCTTCATGGTTTATCTTTGATGAACAACTTAGAGAAGAAATAAGAATTTCAATTGAGAAACTTTTGTTACCAGCTTATGAAAATTTCATTGGGAGGTTTCAGAATATTACTGAAGTTGGTAAGCATGCTGAAAAATACATTAAGTATGAAACAGAGGAGATTGAAGCAAGACTTAATGATTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCAGAAAGAGAAGCTAA 1938 0.4164 MSENGEEKLLAVARHIAKTLGHNNNMADDILQIFSNFDGRFSKENLSEKVAVTDTDPRACAALDHCLKNLDRRISHFVSSDHPIWADSADAGAFLDAVDDLIASVAEWNHLTGDKSIATCLVRAEDMLQHAMFRLEEEFRSLMERGGESFDLTQPYRNSDSAGNLSNLPFDSEEEDEEIENGGEEEDLIPVAMPVTDYDIVIDALPSATINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEDVHKMPWNDIEDEIERWIKASNVALKILFTSERRLCDRVFFGFSSVADFSFMEVCRGSTVQLLNFADAVAIGSRSPERLFKILDVFETLRDLIPEFEVLFCDQYSVSLRNEALTIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKEYPKIDDRMSSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNCRYIVQKAEDSELGALLGDDWIKKHTAKIRQYHAQYQRSSWNRVFGFLKVEYNGSIPPNGVAKSMKEKLKSFNMIFDDICRVQSSWFIFDEQLREEIRISIEKLLLPAYENFIGRFQNITEVGKHAEKYIKYETEEIEARLNDLFQGSSGSTGSRKRS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02926 645 SUPERFAMILY Cullin repeat-like 85 632 IPR016159 -
Tsu05g02926 645 MobiDBLite consensus disorder prediction 153 187 - -
Tsu05g02926 645 MobiDBLite consensus disorder prediction 170 185 - -
Tsu05g02926 645 Pfam Exo70 exocyst complex subunit 271 630 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu05g02926 645 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 633 - -
Tsu05g02926 645 Gene3D Exocyst complex component Exo70 84 642 - -
Tsu05g02926 645 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 633 IPR004140 GO:0000145|GO:0006887
Tsu05g02926 645 MobiDBLite consensus disorder prediction 153 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02926 Tsu-Chr5 39694984 39697458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02926 1 636 EXO70 exocyst subunit family AT5G58430 69.122 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02926 K07195 - gmx:100803694 1018.84