Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02914 ATGGTGAAAGAAACTGATCCTGATGATTTTTCACCTACCAAGCTATTTGCTCAAAGCGAATGTTGTGCCAGAAGTTCAGACTTCTATGAATCATCTGAAGTTGATGTAAAAGTTGCTGATTACAAAACTGCAACTGTTGATGTACCTAATTGCACTGATATTAATGTTGATGTTGTATTTCAAACCAATGACACGGTTGGTTCTGACGTTGATCCCAATCAAGCAAATTTTGAGAAGAATGTCGTGCTGAATGCTGGAGCATCCTTGGAACAACCTGTTGTAAATTCTCTCAAGGAAACCGTCCCTGAGAAGAATGTTGAGAAGAATGATGGAGCATCTGTAACTTCATCTGGTTCATCTGATGAAGACTGTAAAGGGATTTGGCGTCTATTATGGAGTGAACAACATCCTGGTGTTATGAGTGCTATATGTGTCCTTAAGAAGAGGAAATCTGATCTTACCTTGCATCACAAACTATTTGGAGATCACCATGTTCCAGACATTGTTGGAACATCCCGCAAGGCTGCTGCTGCTcctatAATTACTCATTTCAACAAAGCTTCTCGTTCAACCCAGAGAATCGTTCAAACCCTAGCAAAGCTTGAACTTCGATTCTCTGAAAATCGTTCAACCCTAGTTTCATTTTGGCAAAGCTTCGATTTGGTTCAACTTCGATTCACTTCAACTCTCATTCAGAATCAATTGTTCAACCCTCGTTCAGAATTGTTCTCTCAAGCTTCGATACAATTTCTCTGCAAAGCTTCGTTTCAAAATTCTCTCAAGcttcaattcaattttgttcatccTTCAATCCAGATTGAAGGTCTAGCATTTCTTCACAGTAAGGAAGTCAAAGTGATACATGGAGATCTCAAAACTTCTAATATCTTGATTGATTCTAACCACAATGCAAAACTATCCGATTTTGGAGATCAAGAAAAGATGGATTCATGA 954 0.3763 MVKETDPDDFSPTKLFAQSECCARSSDFYESSEVDVKVADYKTATVDVPNCTDINVDVVFQTNDTVGSDVDPNQANFEKNVVLNAGASLEQPVVNSLKETVPEKNVEKNDGASVTSSGSSDEDCKGIWRLLWSEQHPGVMSAICVLKKRKSDLTLHHKLFGDHHVPDIVGTSRKAAAAPIITHFNKASRSTQRIVQTLAKLELRFSENRSTLVSFWQSFDLVQLRFTSTLIQNQLFNPRSELFSQASIQFLCKASFQNSLKLQFNFVHPSIQIEGLAFLHSKEVKVIHGDLKTSNILIDSNHNAKLSDFGDQEKMDS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02914 317 Pfam Protein kinase domain 273 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02914 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Tsu05g02914 317 CDD PKc 273 310 - -
Tsu05g02914 317 SUPERFAMILY Protein kinase-like (PK-like) 274 310 IPR011009 -
Tsu05g02914 317 ProSiteProfiles Protein kinase domain profile. 154 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02914 317 PANTHER OS01G0588500 PROTEIN-RELATED 274 312 - -
Tsu05g02914 317 Gene3D Transferase(Phosphotransferase) domain 1 222 316 - -
Tsu05g02914 317 PANTHER APK1B, PUTATIVE-RELATED 274 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02914 Tsu-Chr5 39545320 39552363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02914 224 310 MAP Kinase Kinase Kinase AT3G18750 33.333 3.90e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu05g02914 Pkinase 4.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02914 - - mtr:MTR_3g067765 67.3958