Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02911 ATGGCTACAGAAGCAAGAGCGAAGTTCCAAAACCCAGATTTCCGACCCGATTTCCAAACCCTAACGCCGTCAACTGACGACGGTCTTCACTCCTGGCAGTTAATGATTGCCGGATCCATTGCCGGTTGCGTAGAACACATGGCAATGTTTCCGGTTGACACCGTTAAAACTCACATGCAAGCAATCACATCATGTCCAATTCAATCCGTTTCAATCCGTCAAGCTTTCAATTCAATTCTTCAATCGGAAGGTCCCTCGGCGTTTTACCGCGGTATCGGTGCAATGGGCCTTGGCGCGGGCCCAGCACACGCCGTTCATTTTTTGGTTATTGAGACTTGTAAAAAAAGGTTCTCACAATGGAACCTTAATAAAGATGTTGCTAGTGCTGCTTCTGGTGTCTGCGCCGCGGTTGCGAGTGACGCCGTTTTTACTCCGATGGATATGGTGAAACAGAGATTGCAGTTGAGTAATAGTGGTTATAAAGGTGTTTTTGATTGTGTTAAGAGGGTTATGAGTGAGGAAGGGTTTGGTGCTTTTTATGCTAGTTACAGGACTACTGTTTTGATGAACGCACCTTTTTATGCTGTGCATGTTGCGGCTTATGACGCAGCGAAACGGGGATTGAATGAGGTTTCATCGGAGAGTGTTGATGATGAACGGTTGATTATTCATGCTACGGCTGGTGCTGCGGCGGGTGGTTTGGCTGCTGCTGTTACAACACCACTTGATGTTGTTAAAACTCAATTGCAATGTCAGGGTGTATGTGGATGTGATAGGTTCAAAAGTGGTTCAATCGGTGATGTTATTAAAACAATAGTGAAAAAGGATGGATACAGAGGGCTCATGCGAGGATGGGTTCCAAGGATGCTCTTTCATGCTCCTGCAGCCGCTATTTCCTGGTCTACATATGAAGCTGGAAAGTCCTTTTTCCAAGATTACAATGAGCAGAAAGATACCGGAACCATCACCTAA 972 0.4578 MATEARAKFQNPDFRPDFQTLTPSTDDGLHSWQLMIAGSIAGCVEHMAMFPVDTVKTHMQAITSCPIQSVSIRQAFNSILQSEGPSAFYRGIGAMGLGAGPAHAVHFLVIETCKKRFSQWNLNKDVASAASGVCAAVASDAVFTPMDMVKQRLQLSNSGYKGVFDCVKRVMSEEGFGAFYASYRTTVLMNAPFYAVHVAAYDAAKRGLNEVSSESVDDERLIIHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWVPRMLFHAPAAAISWSTYEAGKSFFQDYNEQKDTGTIT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02911 323 PANTHER MITOFERRIN-1-RELATED 1 318 - -
Tsu05g02911 323 SUPERFAMILY Mitochondrial carrier 28 304 IPR023395 -
Tsu05g02911 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 207 IPR018108 -
Tsu05g02911 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 116 IPR018108 -
Tsu05g02911 323 Pfam Mitochondrial carrier protein 221 313 IPR018108 -
Tsu05g02911 323 Pfam Mitochondrial carrier protein 30 118 IPR018108 -
Tsu05g02911 323 Pfam Mitochondrial carrier protein 127 210 IPR018108 -
Tsu05g02911 323 Gene3D Mitochondrial carrier domain 123 323 IPR023395 -
Tsu05g02911 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 309 IPR018108 -
Tsu05g02911 323 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02911 Tsu-Chr5 39463710 39468896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02911 1 319 Chloroplast and Mitochondria Gene Families AT1G07030 69.725 9.92e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02911 K15113 - gmx:100802640 535.028