Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02907 ATGATCCAAAACATGTCACCCCTTGTTCTTTTCCCTTTAGCTATCTTACTATTCTTCTTctacaaaaaacacaaaacatcTAAGAAACAAACTCTTCCACCAGGTCCTAAAGGCCTTCCTTTCATTGGAAACTTACACCAAATTGATAGTTCATCTCTTGGTTTAAGTTTCTATGAACTCTCAAAGAAATATGGTTCTTTAATCTTTCTTAAACTTGGTTCAAGGCAAACACTTGTTGTTTCCTCAGCTAAAATGGCCAAACAAGTAATGAAAACACATGATATCGATTTTTGTAATCGACCGGCTTTAACCAGTCATATGAAATTCTCATATGATGGATTAGACCAAGTATTTTCGCCGTATAGAGAATATTGGAGACACACTAAGAAATTTTCTTTCATCCATTTTCTAAGTGTCAAAAGAGTCTCAATGTTTGCACCGGTTAGAAAATACGAGGTAACTCAAATGATCAAGAGGATATCGGAACAATATGCTTCTTCCAACAAAGCTGTTAACTTACATGAGCTTCTCATGGGTGTTACAAGCGCGATAGTTTGTAAGACTGCGTTCGGTAGAAGGTTCGAAGATGAAGGAACCGAGCGTAGTATGTTTCATGATTTGCTTAAAGAAGCGCAGGAATTGACTGTTTCGTTCTTTTACACGGATTATTTGCCTTTTGTTGGAGGGATTGTTGATAAGTTCAGTGGAATAATGACTCGTCTCGAGAAATTGTTCGCGATTTTTGAtggattttttcaaaatgttgtTGATGAACATCTTGATCCTGAAAGGAAGCAGTTGTCTCCACAAGAAGATGTAATTGATGCCTTGATTGGATTGAAGAATGATCCTTACTGGTCAATGGATCTCAGACCTGAGCACATCAAACCCTTGATCATGAATATGGTGTTGGCAGGGACAGACACAATTTCTGCTGCAGTGGTTTGGGCTATGACTGCATTAATGCAGAATCCAAGAGTGATGCAGAAAGTACAAGAAGAGATTCGAAAAGTGAATGAAGGAAAGAGTTTTATAGAGGAAGAAGATGTTCAAGAGCTTCCATATCTCAAGGCAGTTATAAAAGAAACAATGAGATTGTATCCATCATTGCCCATGCTTTTTCCAAGAGAAACGATGAAAAAGTGTGAAATTGAAGGGTACGAAATTCCAGAGAAGACATTGGTGTTTGTGAATGCTTGGGCTATCCATAGAGACCCAGAAGCGTATGAGAATCCAGAAGAGTTTTATCCAGAGAGATTTGTAGGCACTGATATAGATTTTAAAGGACAAGATTTTGAGCTAGTTCCATTTGGTTCAGGGCGAAGAGTTTGCCCCGGATTGAACATGGCAGTTGCTACCGTGGATCTAGTACTTGCTAATCTTCTCTATTTGTTTGATTGGGAAATGCCTGAAGGAGTAAAGACAGAAGATATAGACATTGAGGGTCTTCCGGGACTTGTTCAACACAAGAAAAATCCTCTCTGCCTTGTTCCTAAGAAGCAAATTGAATGTGTGTGA 1518 0.3768 MIQNMSPLVLFPLAILLFFFYKKHKTSKKQTLPPGPKGLPFIGNLHQIDSSSLGLSFYELSKKYGSLIFLKLGSRQTLVVSSAKMAKQVMKTHDIDFCNRPALTSHMKFSYDGLDQVFSPYREYWRHTKKFSFIHFLSVKRVSMFAPVRKYEVTQMIKRISEQYASSNKAVNLHELLMGVTSAIVCKTAFGRRFEDEGTERSMFHDLLKEAQELTVSFFYTDYLPFVGGIVDKFSGIMTRLEKLFAIFDGFFQNVVDEHLDPERKQLSPQEDVIDALIGLKNDPYWSMDLRPEHIKPLIMNMVLAGTDTISAAVVWAMTALMQNPRVMQKVQEEIRKVNEGKSFIEEEDVQELPYLKAVIKETMRLYPSLPMLFPRETMKKCEIEGYEIPEKTLVFVNAWAIHRDPEAYENPEEFYPERFVGTDIDFKGQDFELVPFGSGRRVCPGLNMAVATVDLVLANLLYLFDWEMPEGVKTEDIDIEGLPGLVQHKKNPLCLVPKKQIECV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02907 505 PANTHER CYTOCHROME P450 71B11-RELATED 3 505 - -
Tsu05g02907 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 3 505 - -
Tsu05g02907 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 SUPERFAMILY Cytochrome P450 33 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 Pfam Cytochrome P450 33 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02907 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Tsu05g02907 505 Coils Coil 328 348 - -
Tsu05g02907 505 Gene3D Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02907 Tsu-Chr5 39425072 39427769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02907 8 502 Cytochrome P450 AT4G31500 43.775 8.79e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02907 - - gmx:100803017 732.25