Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02899 ATGAGATACACTTCATCCTTTAGAAGTCCAAAGAAAGAAGAGCATGAAGTACCACAAGTTATCACTCCAACACTACCAAACTTCAACAAATCTTACACTAATGAAGATCTCTATATTTTCGACGAACTCGAAGAGTACTTAAacgaagaaaatgaagaaaacgaACAAAAGTTATCGCCACAAAACACTTGTAATAGTAGTAATGAGCTTCATTGGGATTTAATGGAATGGGAGGAATTTTCCTTTGTTGAAGGAAAAGATGAGAACATAAGCAAATGTAATATTGATGAGAAGAAGATTATAAAGAGAGAAAATTACAATGATGGATTTTGGGAAATGGATGATGAAAAGAGTGTggctttgaatttgaatttgaatttgaactatCAAGAGGTTTTGGATGCATGGTCTGACCGTGGCTCTTTATGGGCTGATGATTGTTCTCTTAATTCATTGTCCTCCTCCAATAATTGCAACTATatGGGAGAAGTGCCAATATTGGAAGAAGAGAGAGCAAGAAGAGAAGCAAGTGTTCTTAGGTACAAAGAAAAACGTCAGAACAGATTGTTTTCCAAGAAGATAAGATACCAAGTTCGGAAATTAAATGCTGATAAAAGACCAAGAATCAAGGTCAcactttttgaataa 648 0.3194 MRYTSSFRSPKKEEHEVPQVITPTLPNFNKSYTNEDLYIFDELEEYLNEENEENEQKLSPQNTCNSSNELHWDLMEWEEFSFVEGKDENISKCNIDEKKIIKRENYNDGFWEMDDEKSVALNLNLNLNYQEVLDAWSDRGSLWADDCSLNSLSSSNNCNYMGEVPILEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKVTLFE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02899 215 ProSiteProfiles CCT domain profile. 174 215 IPR010402 GO:0005515
Tsu05g02899 215 PANTHER CCT MOTIF FAMILY PROTEIN 1 210 - -
Tsu05g02899 215 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 210 - -
Tsu05g02899 215 Pfam CCT motif 174 210 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02899 Tsu-Chr5 39381410 39383045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02899 112 210 C2C2-CO-like Transcription Factor Family AT1G73870 40.517 8.91e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu05g02899 CCT 2.8e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02899 - - cam:101495184 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02899 05 39381410 39383045 Tsu05g02899 05 39381410 39383045 ECH