Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02897 ATGTCGAAGCTAGTTTGCGTCACCGGCGGCAGCGGATGCATCGGTTCATGGCTTGTCCATCTCCTTCTCCACCGCGGCTATACCGTTCACGCCACCGTCCAAAATCTCAATGATGAAAACGAAACGAAGCATCTAGAAGCTCTTGAAGGAGCACAAACTAATCTCCGTCTCTTCCAGATCGATCTTCTCAACTACGACACAATCCTCGCCGCTGTCCACGGTTGCGTCGGAGTTTTTCACCTCGCTTCACCTTGCATTGTAGACAAAGTTCATGATCCAcagAAGGAGCTTCTGGATCCTGCAATTAAAGGGACTTTGAATGTGCTTACTGCAGCTAAGGAAGCAGGGGTGAAGCGTGTGGTTGTTACTTCGTCTATCTCCGCAATTACTCCTAGTCCTGATTGGCCTTCTGATCTTGttaaaagagaggattgttggACTGATGTTGAATATTGCAAgaaaaaagagTTGTGGTATCCGTTGTCCAAAACATTGGCTGAGAAAGCTGCATGGGATTTTTCCAAAGAAAATGGTTTGGATGTTGTTGTGGTGAATCCTGGTACTGTGATGGGTCCTGTTATTCCACCAAGGCTTAATGCAAGCATGCTCATGCTTGTGAGACTTCTTGAAGGCTGCTCTGAAACATTTGAAGACTATTTTATGGGATTGGTCCACTTCAAAGATGTAGCATTGGCACATATTTTGGTGTATGAGAACAAAGAAGCATCTGGTAGACATTTGTGTGTTGAAACTATCTCTCACTATGGTGATTTTGCGGCAAAAGTTGGTGAACTTTATCCAGAATATAATGTTCCTAGgaTGCAACGAGATACACAACCTGGATTGTTGAGAGCGAATGATGGATCAAAGAAGCTCATAGATTTGGGTTTGGAATTCATTCCAATGGAGCAAATTATCAAGGATGCTGTAGAGAGTTTGAAGAACAAAGGATTCATTTCTTGA 963 0.4226 MSKLVCVTGGSGCIGSWLVHLLLHRGYTVHATVQNLNDENETKHLEALEGAQTNLRLFQIDLLNYDTILAAVHGCVGVFHLASPCIVDKVHDPQKELLDPAIKGTLNVLTAAKEAGVKRVVVTSSISAITPSPDWPSDLVKREDCWTDVEYCKKKELWYPLSKTLAEKAAWDFSKENGLDVVVVNPGTVMGPVIPPRLNASMLMLVRLLEGCSETFEDYFMGLVHFKDVALAHILVYENKEASGRHLCVETISHYGDFAAKVGELYPEYNVPRMQRDTQPGLLRANDGSKKLIDLGLEFIPMEQIIKDAVESLKNKGFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02897 320 CDD FR_SDR_e 5 297 - -
Tsu05g02897 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Tsu05g02897 320 Pfam NAD dependent epimerase/dehydratase family 5 242 IPR001509 -
Tsu05g02897 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Tsu05g02897 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
Tsu05g02897 320 Gene3D - 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02897 Tsu-Chr5 39370528 39374022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02897 3 320 Monolignol Biosynthesis Gene Families AT5G58490 75.786 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02897 - - gmx:100803241 570.081