Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02887 ATGGATATTCAAGGAAACAAAAGTACCTGCCACCATATTGAAATTATATCGATAAAGGCAATGACTTCCCGTGCAAATGCGTTCGATGCTGCCCATATAACAGCAAGGCCAACGTACATACATAAGAAAAGCCATTTTGGGGCAAAGTACACTCCGCCTTTATTTGTGCCTGTTGATATTAGGATTATACTTTGCAATGTTTATGATCCTGCATATGCCTTTCCAACCATGAAAAAGCATGAGTTACTATGCACACATTCTATGAAAACACCAAGTAAAAGCTTAACCAAAGTCCATTTACGTATTGACTTCTATCAAAATTCGAAACCGTACTTGCAAATTCAACGAAAACAGTACACGCGGCTAGAAAACAGGCGACACGGGTTTGAGCTTGGCGTTAACAAAATCTCCCTTCTTAGTGTTGCAGTTAGGCTTCCGATGATTGTGGTCGAGGTTTATGTCGGGGAAAGTAAGATTAATCCTCCTCAACAGTCGGAGAGCTCTCCTAAGCGCTCTCTACTCATTGAAGGTGTTGCACAGAACACTAATGGCAGTGTTTATGTCCCTGAGGGTGCTAATGATGTGGAGGTTACCGGGTCACCACCAGAAAAGGAAATTTTACATCGGGAATTAAGGTCTGTTTTGGAAAATCAGTTTCTTCAATACATTGGATGA 675 0.4119 MDIQGNKSTCHHIEIISIKAMTSRANAFDAAHITARPTYIHKKSHFGAKYTPPLFVPVDIRIILCNVYDPAYAFPTMKKHELLCTHSMKTPSKSLTKVHLRIDFYQNSKPYLQIQRKQYTRLENRRHGFELGVNKISLLSVAVRLPMIVVEVYVGESKINPPQQSESSPKRSLLIEGVAQNTNGSVYVPEGANDVEVTGSPPEKEILHRELRSVLENQFLQYIG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02887 224 PANTHER CATION TRANSPORTING ATPASE 147 210 - -
Tsu05g02887 224 PANTHER CALCIUM-TRANSPORTING ATPASE 147 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02887 Tsu-Chr5 39257760 39263079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02887 147 207 Primary Pumps ATPases AT5G57110 49.180 1.96e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02887 K01537 - gmx:100792945 87.8113