Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02884 ATGAAGGATGTGTTTCTTCACATCAAGTTGATGGATCAGGCAATGGAAAGTGATCAGCCTGCAATTTTGATTCAACAACAGTGTGCTGACGGTGAGATTCAGGTTCAAGGGTCTGTATTGAAGCTCACTTTTGCTTGCAATTCTCTTATTTCATGGCCTGCCATGTCGGTTGCATTGGATAGTTTCTCCATTTGTAGCAAGAGGCCACAAATCTTTGAGAAGAAAGGTTTCACTTTAGGGGTTGTTCTTCTCGTTGTTAGGTCCGGGCATGAAAAGTTGGTCAAGACCCGGGTTGAGAATGCTTTGAAGTTTGCTTTAAAGAAGCCGAAAAACAATGCTGTGAATGTGAAGCTTTCATTTGGACTTTGTGGGTGTCAGGAAGAGAGTTTCAAGGGAAGAGAACTAGGGGAGATTGGAGAAGATAGTGGTAGCGGAAAGGAGTTTGAGAATTCTAGCCAAAAGATTCAGCTTCAAATGCCTTTGCCTACCTCATCTTTCATTGTATCGGTAGATGAATGGCAGACGATAAAGTCAGGTGGCGATGAGATTGCAAAATGGTTGTTAAATGCAGATAGCGTTGAGTTTACAGAGCAGATTGGACCCAATTCTTATAAAGGAGTCTACATGGGGAAAAGGGTTGGAATTGAGAAGCTGAAAGGGTGTGAAAAAGGAAATTCTTACAAGTTTGAGCTCCATAGAGATCTTCTAGAACTGATGACTTGTGGACATAGAAACATTCTGCAGTTCTGTGGTATTTGTGTGGATGATAATCATGGATTATGTGTGGTGACTAAGTTCATGGTACGTGGGTCGGTCCATGACTTAATGCTAAAgaacaagaagcttcagagtAAAGATGTTGTTAGAATCGCGGTTGATGTGGCTGAGGGGATCAAATTTATGAATGACCATGGTGTTGCATATAGAGACCTTAATACACAGAGGATTCTATTAGATAGGCATGGGAATGCTTGCTTGGGAGATATGGGTGTAGTCACTGCCTGCAAGAGTGTTGGTGAAGCAACGGAGTATGAAACCGATGGTTATAGGTGGCTAGCTCCTGAGATAATTGCAGGAGACCCTGAGAGTGTGATAGAGACATCTACGAGCAACATTTATAGTTATGGGATGATAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTACACTTTCTCCTGTGCAGGCCGCAGTTGGTATTGCCGCTTGTGGTCTTAGACCTGAAATTCCTAAGGACTGTCAACCTAATCTAAGATACATTATGACAAAATGCTGGAACAACACCCCTTCCAAACGTCCTAAGTTCTCCGATATTTTAGCTATATTGCTGCAACCATACAACAACAATAGGTAA 1356 0.4159 MKDVFLHIKLMDQAMESDQPAILIQQQCADGEIQVQGSVLKLTFACNSLISWPAMSVALDSFSICSKRPQIFEKKGFTLGVVLLVVRSGHEKLVKTRVENALKFALKKPKNNAVNVKLSFGLCGCQEESFKGRELGEIGEDSGSGKEFENSSQKIQLQMPLPTSSFIVSVDEWQTIKSGGDEIAKWLLNADSVEFTEQIGPNSYKGVYMGKRVGIEKLKGCEKGNSYKFELHRDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMVRGSVHDLMLKNKKLQSKDVVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGVVTACKSVGEATEYETDGYRWLAPEIIAGDPESVIETSTSNIYSYGMIIWEMVTGEAAYSTLSPVQAAVGIAACGLRPEIPKDCQPNLRYIMTKCWNNTPSKRPKFSDILAILLQPYNNNR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02884 451 SUPERFAMILY Protein kinase-like (PK-like) 174 443 IPR011009 -
Tsu05g02884 451 PRINTS Tyrosine kinase catalytic domain signature 264 277 IPR001245 GO:0004672|GO:0006468
Tsu05g02884 451 PRINTS Tyrosine kinase catalytic domain signature 300 318 IPR001245 GO:0004672|GO:0006468
Tsu05g02884 451 PRINTS Tyrosine kinase catalytic domain signature 414 436 IPR001245 GO:0004672|GO:0006468
Tsu05g02884 451 PRINTS Tyrosine kinase catalytic domain signature 370 392 IPR001245 GO:0004672|GO:0006468
Tsu05g02884 451 Gene3D Transferase(Phosphotransferase) domain 1 186 448 - -
Tsu05g02884 451 PANTHER SERINE-THREONINE PROTEIN KINASE 1 447 - -
Tsu05g02884 451 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 447 - -
Tsu05g02884 451 ProSiteProfiles Protein kinase domain profile. 193 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02884 451 Pfam Protein tyrosine and serine/threonine kinase 225 442 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02884 Tsu-Chr5 39230591 39234266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02884 179 445 MAP Kinase Kinase Kinase AT2G17700 34.307 3.08e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Tsu05g02884 PK_Tyr_Ser-Thr 9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02884 - - pvu:PHAVU_008G258400g 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02884 05 39230591 39234266 Tsu05g02884 05 39230591 39234266 ECH